Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:116537155..116541005-chr9:116544045..116545927,3	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10429635	0.88[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10817520	0.96[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10981921	0.86[CHB][hapmap];0.91[JPT][hapmap];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10981924	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10981925	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[JPT][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10981932	0.83[ASN][1000 genomes]
rs10981941	0.94[ASN][1000 genomes]
rs10981978	0.84[ASN][1000 genomes]
rs10981981	0.80[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs12376085	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12380621	0.87[ASN][1000 genomes]
rs12380863	0.93[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs12554801	0.91[ASN][1000 genomes]
rs12555454	0.88[ASN][1000 genomes]
rs1409382	0.89[ASN][1000 genomes]
rs4979283	0.94[EUR][1000 genomes]
rs7031010	0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7035099	0.95[ASN][1000 genomes]
rs913080	0.88[CEU][hapmap]
rs960957	0.92[EUR][1000 genomes]
rs987073	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116539000-116551400	Weak transcription	Fetal Kidney	kidney
2	chr9:116543200-116550200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:116543800-116547200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr9:116544000-116544600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr9:116544000-116544800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr9:116544200-116544600	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr9:116544400-116544600	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived

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