Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10429635	0.85[ASN][1000 genomes]
rs10817520	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10981921	0.86[ASN][1000 genomes]
rs10981922	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10981924	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10981925	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10981932	0.85[ASN][1000 genomes]
rs10981941	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10981978	0.85[ASN][1000 genomes]
rs10981981	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12380621	0.84[ASN][1000 genomes]
rs12380863	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12554801	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12555454	0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1409382	0.85[ASN][1000 genomes]
rs59045685	0.90[EUR][1000 genomes]
rs7030996	0.90[EUR][1000 genomes]
rs7031010	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7035099	0.97[ASN][1000 genomes]
rs913080	0.89[EUR][1000 genomes]
rs949527	0.86[EUR][1000 genomes]
rs987073	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116557800-116569800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr9:116565600-116566800	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr9:116566600-116567000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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