Variant report

Variant	rs10992209
Chromosome Location	chr9:92700084-92700085
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92699147..92701279-chr9:92703484..92705697,2	K562	blood:
2	chr9:92682411..92684734-chr9:92700082..92701810,2	MCF-7	breast:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10820845	0.93[YRI][hapmap]
rs10820848	0.92[YRI][hapmap];0.80[AFR][1000 genomes]
rs10820884	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10820923	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10821065	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10821308	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10821358	0.89[EUR][1000 genomes]
rs10821381	0.89[EUR][1000 genomes]
rs10992155	0.93[YRI][hapmap]
rs10992338	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10992363	0.88[YRI][hapmap]
rs10992637	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10993051	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10993105	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10993510	0.83[EUR][1000 genomes]
rs1155647	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1319777	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1561948	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1561949	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1561950	1.00[CHB][hapmap];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1866766	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2043963	0.92[YRI][hapmap];0.88[AFR][1000 genomes]
rs2196921	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2196923	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2379196	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7025971	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7036596	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7466044	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7861478	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7862411	1.00[YRI][hapmap];0.88[AFR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92693200-92703000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr9:92693600-92703000	Weak transcription	NHDF-Ad	bronchial
3	chr9:92695800-92703800	Weak transcription	Aorta	Aorta
4	chr9:92698200-92701800	Weak transcription	Ovary	ovary
5	chr9:92698200-92704400	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr9:92698400-92701600	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr9:92698400-92703800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr9:92698400-92703800	Weak transcription	Psoas Muscle	Psoas
9	chr9:92698800-92703000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:92698800-92703800	Weak transcription	Colon Smooth Muscle	Colon
11	chr9:92698800-92703800	Weak transcription	Rectal Smooth Muscle	rectum
12	chr9:92698800-92704000	Weak transcription	Right Atrium	heart

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