Variant report

Variant	rs1866766
Chromosome Location	chr9:92702373-92702374
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92693505..92695699-chr9:92701901..92704107,2	MCF-7	breast:
2	chr9:92687092..92689404-chr9:92701251..92704588,3	MCF-7	breast:

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10820845	0.85[AFR][1000 genomes]
rs10820884	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10820923	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10821065	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10821308	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10821358	0.89[EUR][1000 genomes]
rs10821381	0.89[EUR][1000 genomes]
rs10992155	0.84[AFR][1000 genomes]
rs10992209	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10992338	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10992363	0.92[AFR][1000 genomes]
rs10992637	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10993051	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10993105	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10993510	0.83[EUR][1000 genomes]
rs1155647	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1319777	0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1561948	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1561949	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1561950	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2196921	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2196923	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2379196	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7025971	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7036596	0.88[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7047355	0.87[AFR][1000 genomes]
rs7466044	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7848827	0.88[AFR][1000 genomes]
rs7858942	0.84[AFR][1000 genomes]
rs7861478	0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7861891	0.88[AFR][1000 genomes]
rs7863076	0.84[AFR][1000 genomes]
rs7864499	0.82[AFR][1000 genomes]
rs7875030	0.87[AFR][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92693200-92703000	Weak transcription	Skeletal Muscle Male	skeletal muscle
2	chr9:92693600-92703000	Weak transcription	NHDF-Ad	bronchial
3	chr9:92695800-92703800	Weak transcription	Aorta	Aorta
4	chr9:92698200-92704400	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr9:92698400-92703800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr9:92698400-92703800	Weak transcription	Psoas Muscle	Psoas
7	chr9:92698800-92703000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr9:92698800-92703800	Weak transcription	Colon Smooth Muscle	Colon
9	chr9:92698800-92703800	Weak transcription	Rectal Smooth Muscle	rectum
10	chr9:92698800-92704000	Weak transcription	Right Atrium	heart
11	chr9:92701000-92702600	Enhancers	Primary hematopoietic stem cells	blood
12	chr9:92701200-92702800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr9:92701400-92702600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr9:92701400-92704600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
15	chr9:92701600-92702400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr9:92701600-92704800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr9:92701800-92702400	Bivalent Enhancer	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr9:92701800-92702600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr9:92701800-92704800	Enhancers	Pancreas	Pancrea
20	chr9:92701800-92705600	Enhancers	Ovary	ovary
21	chr9:92702000-92703000	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr9:92702200-92703600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr9:92702200-92705200	Enhancers	Placenta	Placenta

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