Variant report

Variant	rs10993051
Chromosome Location	chr9:92720577-92720578
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92714067..92716934-chr9:92720447..92722876,2	MCF-7	breast:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10465161	0.84[AFR][1000 genomes]
rs10465162	0.83[AFR][1000 genomes]
rs10820884	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10820923	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10821065	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10821308	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10821337	0.87[AFR][1000 genomes]
rs10821358	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10821381	0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10992209	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10992338	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10992637	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10993105	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10993136	0.83[AFR][1000 genomes]
rs10993138	0.80[AFR][1000 genomes]
rs10993172	0.83[AFR][1000 genomes]
rs10993173	0.85[AFR][1000 genomes]
rs10993174	0.83[AFR][1000 genomes]
rs10993510	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1155647	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1319777	0.95[EUR][1000 genomes]
rs1561948	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1561949	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1561950	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1866766	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2196921	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2196923	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2379196	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7025971	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7036596	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73482977	0.84[ASN][1000 genomes]
rs7466044	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7861478	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92706000-92723600	Weak transcription	HSMMtube	muscle
2	chr9:92716800-92723200	Weak transcription	Pancreas	Pancrea
3	chr9:92716800-92724000	Weak transcription	Esophagus	oesophagus
4	chr9:92717000-92724200	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr9:92718200-92723600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr9:92718400-92724000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:92719200-92720600	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr9:92719400-92723400	Weak transcription	Rectal Smooth Muscle	rectum
9	chr9:92719600-92724200	Weak transcription	Colon Smooth Muscle	Colon
10	chr9:92719800-92723600	Weak transcription	Skeletal Muscle Male	skeletal muscle
11	chr9:92719800-92723800	Weak transcription	Stomach Smooth Muscle	stomach
12	chr9:92720400-92721200	Enhancers	NHDF-Ad	bronchial

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