Variant report

Variant	rs10993138
Chromosome Location	chr9:92722368-92722369
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:92714067..92716934-chr9:92720447..92722876,2	MCF-7	breast:
2	chr9:92717917..92719509-chr9:92721861..92724237,2	MCF-7	breast:

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10465161	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10465162	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10761354	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10820845	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10820848	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10821308	0.88[AFR][1000 genomes]
rs10821337	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10821382	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10821386	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10821408	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10821442	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10821468	0.86[EUR][1000 genomes]
rs10992155	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10992363	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10993051	0.80[AFR][1000 genomes]
rs10993105	0.80[AFR][1000 genomes]
rs10993136	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10993172	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10993173	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10993174	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10993230	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993257	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993327	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993330	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993331	0.96[EUR][1000 genomes]
rs10993333	0.96[EUR][1000 genomes]
rs10993334	0.89[EUR][1000 genomes]
rs10993342	0.96[EUR][1000 genomes]
rs10993419	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993433	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993434	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993454	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993459	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10993476	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16905994	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1992544	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2043963	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2119295	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2119296	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2149594	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs4142062	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58259287	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs58691804	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7047355	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs714360	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs721830	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs721831	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs749194	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7848827	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7858942	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7861891	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7862411	0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7863792	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7864499	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7875030	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92706000-92723600	Weak transcription	HSMMtube	muscle
2	chr9:92716800-92723200	Weak transcription	Pancreas	Pancrea
3	chr9:92716800-92724000	Weak transcription	Esophagus	oesophagus
4	chr9:92717000-92724200	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr9:92718200-92723600	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr9:92718400-92724000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:92719400-92723400	Weak transcription	Rectal Smooth Muscle	rectum
8	chr9:92719600-92724200	Weak transcription	Colon Smooth Muscle	Colon
9	chr9:92719800-92723600	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr9:92719800-92723800	Weak transcription	Stomach Smooth Muscle	stomach
11	chr9:92720600-92724000	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr9:92721200-92723800	Weak transcription	NHDF-Ad	bronchial

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