Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11014026	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11014084	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11014144	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11014156	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11014175	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11014200	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11014208	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11014210	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11014211	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11014216	0.85[EUR][1000 genomes]
rs12049663	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16917251	0.86[ASN][1000 genomes]
rs17690664	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3829133	0.85[ASN][1000 genomes]
rs61839230	0.85[ASN][1000 genomes]
rs61839231	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs61839258	0.85[ASN][1000 genomes]
rs61841960	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6482438	0.89[EUR][1000 genomes]
rs7077127	0.89[ASN][1000 genomes]
rs7096168	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72786093	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv550042	chr10:18683267-18994583	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv1053675	chr10:18703895-18722912	Enhancers Weak transcription Flanking Active TSS Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18703600-18732000	Weak transcription	Pancreas	Pancrea
2	chr10:18710800-18715200	Enhancers	Fetal Heart	heart
3	chr10:18712800-18714600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr10:18713400-18718200	Weak transcription	Right Ventricle	heart
5	chr10:18713400-18721400	Weak transcription	Left Ventricle	heart
6	chr10:18713400-18727200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr10:18714400-18714600	Enhancers	Ovary	ovary

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