The 2.0 version of rSNPBase

Variant report

Variant rs11185816
Chromosome Location chr10:91383422-91383423
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:91345000-91392800 Weak transcription Hela-S3 cervix
2 chr10:91351600-91403400 Weak transcription Esophagus oesophagus
3 chr10:91352600-91403400 Weak transcription Small Intestine intestine
4 chr10:91353800-91403800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr10:91359400-91393000 Weak transcription NHEK skin
6 chr10:91359800-91403200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr10:91370200-91385800 Weak transcription Brain Inferior Temporal Lobe brain
8 chr10:91370200-91403200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr10:91371000-91392800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr10:91371400-91389400 Weak transcription A549 lung
11 chr10:91371800-91389400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr10:91371800-91393600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr10:91371800-91401600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr10:91371800-91403200 Weak transcription HSMMtube muscle
15 chr10:91372000-91393400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr10:91374200-91384400 Weak transcription Liver Liver
17 chr10:91376000-91385000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr10:91376000-91394200 Weak transcription Primary T cells from cord blood blood
19 chr10:91377200-91385000 Weak transcription HepG2 liver
20 chr10:91378600-91383600 Weak transcription Psoas Muscle Psoas
21 chr10:91378600-91383800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
22 chr10:91380600-91403200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr10:91381000-91383800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr10:91381400-91385600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr10:91381600-91385400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr10:91381600-91390600 Weak transcription Fetal Stomach stomach
27 chr10:91381800-91383600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr10:91381800-91392000 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr10:91382000-91386600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr10:91383200-91384200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr10:91383200-91389800 Enhancers Fetal Heart heart
32 chr10:91383400-91383600 Enhancers Aorta Aorta
33 chr10:91383400-91383800 Enhancers Right Atrium heart
34 chr10:91383400-91383800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
35 chr10:91383400-91384000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
36 chr10:91383400-91384000 Enhancers Skeletal Muscle Female skeletal muscle
37 chr10:91383400-91384000 ZNF genes & repeats Dnd41 blood
38 chr10:91383400-91385000 Enhancers Left Ventricle heart
39 chr10:91383400-91385200 Strong transcription Fetal Intestine Small intestine
40 chr10:91383400-91385400 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015