Variant report
| Variant | rs11188554 |
|---|---|
| Chromosome Location | chr10:97767978-97767979 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:38)
| rs_ID | r2[population] |
|---|---|
| rs10458746 | 1.00[EUR][1000 genomes] |
| rs10786254 | 0.86[ASN][1000 genomes] |
| rs10882703 | 1.00[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs10882706 | 0.86[ASN][1000 genomes] |
| rs11188549 | 1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs11188550 | 1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs11188557 | 1.00[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs11188566 | 1.00[EUR][1000 genomes] |
| rs11188572 | 1.00[EUR][1000 genomes] |
| rs11188578 | 1.00[EUR][1000 genomes] |
| rs11188580 | 1.00[EUR][1000 genomes] |
| rs11188582 | 1.00[EUR][1000 genomes] |
| rs11188583 | 1.00[EUR][1000 genomes] |
| rs11188593 | 1.00[EUR][1000 genomes] |
| rs11188595 | 1.00[EUR][1000 genomes] |
| rs11188598 | 1.00[EUR][1000 genomes] |
| rs11188599 | 1.00[EUR][1000 genomes] |
| rs11188603 | 1.00[EUR][1000 genomes] |
| rs11188608 | 1.00[EUR][1000 genomes] |
| rs11188615 | 0.86[EUR][1000 genomes] |
| rs11188616 | 1.00[EUR][1000 genomes] |
| rs11188623 | 1.00[EUR][1000 genomes] |
| rs11814171 | 1.00[EUR][1000 genomes] |
| rs12219508 | 1.00[EUR][1000 genomes] |
| rs12221239 | 1.00[EUR][1000 genomes] |
| rs12255122 | 0.86[ASN][1000 genomes] |
| rs12414081 | 1.00[EUR][1000 genomes] |
| rs12414410 | 0.86[ASN][1000 genomes] |
| rs12569991 | 1.00[EUR][1000 genomes] |
| rs12570955 | 1.00[EUR][1000 genomes] |
| rs12572217 | 1.00[EUR][1000 genomes] |
| rs17111275 | 1.00[EUR][1000 genomes] |
| rs1974251 | 1.00[EUR][1000 genomes] |
| rs2085492 | 1.00[EUR][1000 genomes] |
| rs3814226 | 1.00[EUR][1000 genomes] |
| rs4145226 | 1.00[EUR][1000 genomes] |
| rs72474879 | 1.00[EUR][1000 genomes] |
| rs7898901 | 1.00[EUR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:97765400-97777200 | Weak transcription | Brain Hippocampus Middle | brain |
| 2 | chr10:97767600-97786600 | Weak transcription | Aorta | Aorta |
