Variant report

Variant	rs11188557
Chromosome Location	chr10:97773843-97773844
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10458746	1.00[EUR][1000 genomes]
rs10786254	0.85[ASN][1000 genomes]
rs10882703	1.00[CEU][hapmap];0.87[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes]
rs10882706	0.85[ASN][1000 genomes]
rs11188544	0.87[CHB][hapmap];0.86[CHD][hapmap];1.00[JPT][hapmap]
rs11188549	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11188550	1.00[CEU][hapmap];0.87[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11188554	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11188566	1.00[EUR][1000 genomes]
rs11188572	1.00[EUR][1000 genomes]
rs11188578	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs11188580	1.00[EUR][1000 genomes]
rs11188582	0.81[CHB][hapmap];1.00[EUR][1000 genomes]
rs11188583	1.00[EUR][1000 genomes]
rs11188593	1.00[EUR][1000 genomes]
rs11188595	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11188598	1.00[EUR][1000 genomes]
rs11188599	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11188603	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11188608	1.00[EUR][1000 genomes]
rs11188615	1.00[CEU][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs11188616	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs11188623	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs11188639	1.00[CEU][hapmap]
rs11188657	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs11814171	1.00[EUR][1000 genomes]
rs12219508	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12221239	1.00[EUR][1000 genomes]
rs12255122	0.87[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12414081	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs12414410	0.85[ASN][1000 genomes]
rs12569991	1.00[EUR][1000 genomes]
rs12570955	1.00[EUR][1000 genomes]
rs12572217	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs17111275	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs1974251	1.00[EUR][1000 genomes]
rs2085492	1.00[EUR][1000 genomes]
rs3814226	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4145226	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs72474879	1.00[EUR][1000 genomes]
rs7898901	1.00[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97765400-97777200	Weak transcription	Brain Hippocampus Middle	brain
2	chr10:97767600-97786600	Weak transcription	Aorta	Aorta
3	chr10:97769800-97776600	Weak transcription	Stomach Smooth Muscle	stomach
4	chr10:97770600-97776800	Weak transcription	Duodenum Smooth Muscle	Duodenum
5	chr10:97771200-97777200	Weak transcription	Left Ventricle	heart
6	chr10:97773800-97774600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:97773800-97774600	Enhancers	K562	blood

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