The 2.0 version of rSNPBase

Variant report

Variant rs11204880
Chromosome Location chr1:151728756-151728757
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151712800-151729400 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr1:151712800-151731800 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr1:151721400-151730600 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr1:151722400-151729200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:151722800-151729200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:151723000-151729200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:151723400-151729000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:151723400-151730000 Weak transcription Placenta Amnion Placenta Amnion
9 chr1:151723400-151730000 Weak transcription HSMM muscle
10 chr1:151723800-151729400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:151723800-151730600 Weak transcription Fetal Brain Male brain
12 chr1:151724000-151729200 Weak transcription Dnd41 blood
13 chr1:151724800-151729200 Weak transcription Fetal Stomach stomach
14 chr1:151724800-151729600 Weak transcription Brain Germinal Matrix brain
15 chr1:151724800-151729800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:151725200-151728800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:151725200-151729400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:151725400-151729200 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr1:151725400-151729600 Weak transcription Aorta Aorta
20 chr1:151725600-151730000 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:151725600-151730600 Weak transcription HSMMtube muscle
22 chr1:151725800-151729200 Weak transcription Primary hematopoietic stem cells blood
23 chr1:151725800-151729400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:151725800-151730000 Weak transcription A549 lung
25 chr1:151725800-151730600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:151726000-151729200 Weak transcription Brain Hippocampus Middle brain
27 chr1:151726000-151729600 Weak transcription Fetal Thymus thymus
28 chr1:151726000-151729600 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr1:151726000-151730400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr1:151726000-151730600 Weak transcription Pancreas Pancrea
31 chr1:151726200-151729400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:151726200-151729400 Weak transcription Spleen Spleen
33 chr1:151726200-151729600 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr1:151726200-151729600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:151726200-151730600 Weak transcription Primary B cells from cord blood blood
36 chr1:151726200-151730600 Weak transcription Esophagus oesophagus
37 chr1:151726200-151731600 Weak transcription Lung lung
38 chr1:151726200-151731800 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:151726400-151729400 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr1:151726400-151730600 Weak transcription NH-A brain
41 chr1:151726600-151729200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:151726600-151729600 Weak transcription Primary T cells fromperipheralblood blood
43 chr1:151726600-151729800 Weak transcription GM12878-XiMat blood
44 chr1:151726600-151730600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr1:151726800-151729400 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr1:151726800-151729600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:151726800-151734800 Strong transcription Primary T cells from cord blood blood
48 chr1:151727000-151729200 Weak transcription Fetal Intestine Small intestine
49 chr1:151727000-151729600 Weak transcription Brain Cingulate Gyrus brain
50 chr1:151727000-151730000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015