The 2.0 version of rSNPBase

Variant report

Variant rs11689707
Chromosome Location chr2:72722464-72722465
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72691400-72724200 Weak transcription Psoas Muscle Psoas
2 chr2:72691400-72726400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr2:72691600-72724200 Weak transcription HUVEC blood vessel
4 chr2:72691600-72741800 Weak transcription Colon Smooth Muscle Colon
5 chr2:72692400-72742000 Weak transcription Small Intestine intestine
6 chr2:72692600-72727600 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr2:72699600-72744600 Weak transcription Liver Liver
8 chr2:72700200-72742600 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr2:72702600-72727000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:72702600-72727600 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr2:72702600-72743600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr2:72702800-72724800 Weak transcription Brain Substantia Nigra brain
13 chr2:72702800-72728200 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:72703000-72736400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr2:72703200-72727600 Weak transcription Rectal Smooth Muscle rectum
16 chr2:72703200-72727800 Weak transcription NHEK skin
17 chr2:72703200-72728000 Weak transcription Brain Inferior Temporal Lobe brain
18 chr2:72703200-72728600 Weak transcription Right Ventricle heart
19 chr2:72703200-72731000 Weak transcription Left Ventricle heart
20 chr2:72703200-72732600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:72703200-72732600 Weak transcription Lung lung
22 chr2:72703200-72735800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:72703200-72742800 Weak transcription HSMM muscle
24 chr2:72703200-72743000 Weak transcription Pancreas Pancrea
25 chr2:72703200-72743400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr2:72703200-72743800 Weak transcription Brain Anterior Caudate brain
27 chr2:72703400-72728600 Weak transcription Esophagus oesophagus
28 chr2:72703400-72729800 Weak transcription Brain Germinal Matrix brain
29 chr2:72703400-72729800 Weak transcription Fetal Stomach stomach
30 chr2:72703400-72741800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr2:72703400-72744200 Weak transcription A549 lung
32 chr2:72703400-72752200 Weak transcription Duodenum Mucosa Duodenum
33 chr2:72703600-72745000 Weak transcription Fetal Intestine Large intestine
34 chr2:72704200-72728400 Weak transcription Fetal Brain Female brain
35 chr2:72704800-72728400 Weak transcription Primary T cells fromperipheralblood blood
36 chr2:72706000-72729000 Weak transcription HepG2 liver
37 chr2:72707000-72725800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr2:72707200-72724800 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr2:72707800-72731000 Weak transcription Aorta Aorta
40 chr2:72707800-72742800 Weak transcription Fetal Heart heart
41 chr2:72708000-72725600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:72708000-72727200 Weak transcription Brain Cingulate Gyrus brain
43 chr2:72708000-72728200 Weak transcription HSMMtube muscle
44 chr2:72708000-72744600 Weak transcription Fetal Lung lung
45 chr2:72708200-72724400 Weak transcription Brain Angular Gyrus brain
46 chr2:72708200-72737000 Weak transcription Ovary ovary
47 chr2:72708600-72741800 Weak transcription Stomach Smooth Muscle stomach
48 chr2:72714000-72728200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr2:72714400-72724800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr2:72716000-72725000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015