Variant report

Variant rs11689954
Chromosome Location chr2:39113455-39113456
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39103800-39114000 Weak transcription Lung lung
2 chr2:39103800-39120200 Weak transcription Left Ventricle heart
3 chr2:39104000-39114200 Weak transcription Primary monocytes fromperipheralblood blood
4 chr2:39104200-39113800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr2:39104200-39113800 Weak transcription Fetal Lung lung
6 chr2:39104200-39114400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr2:39104200-39114400 Weak transcription Colon Smooth Muscle Colon
8 chr2:39104200-39114800 Weak transcription Brain Cingulate Gyrus brain
9 chr2:39104200-39114800 Weak transcription Brain Hippocampus Middle brain
10 chr2:39104200-39115800 Weak transcription Brain Germinal Matrix brain
11 chr2:39104200-39119400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr2:39104200-39122200 Weak transcription Ovary ovary
13 chr2:39104200-39129000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
14 chr2:39107000-39113600 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr2:39108400-39113600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:39108400-39113800 Weak transcription Brain Anterior Caudate brain
17 chr2:39108800-39114600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr2:39110200-39186800 Weak transcription Stomach Smooth Muscle stomach
19 chr2:39110400-39115800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr2:39110400-39120600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr2:39112000-39113600 Weak transcription Fetal Stomach stomach
22 chr2:39112800-39113800 Enhancers Skeletal Muscle Female skeletal muscle
23 chr2:39113000-39113600 Enhancers Fetal Heart heart
24 chr2:39113400-39113600 Enhancers Psoas Muscle Psoas
25 chr2:39113400-39113600 Enhancers Skeletal Muscle Male skeletal muscle
26 chr2:39113400-39113800 Enhancers HSMMtube muscle

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