Variant report

Variant	rs13035182
Chromosome Location	chr2:39131283-39131284
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:39130479..39132831-chr2:39133417..39135082,2	K562	blood:
2	chr2:39129931..39132831-chr2:39133199..39135082,3	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs1010858	0.81[EUR][1000 genomes]
rs1010859	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[YRI][hapmap];0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10181808	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10204999	0.90[EUR][1000 genomes]
rs11124654	0.91[EUR][1000 genomes]
rs1131752	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11681583	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs11689954	0.88[CEU][hapmap];1.00[CHB][hapmap];0.89[EUR][1000 genomes]
rs12621073	0.95[EUR][1000 genomes]
rs12712626	0.89[CHB][hapmap]
rs12712628	0.87[EUR][1000 genomes]
rs17422748	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3099940	0.83[CEU][hapmap];0.81[EUR][1000 genomes]
rs3099941	0.83[CEU][hapmap];0.82[EUR][1000 genomes]
rs3099942	0.82[CEU][hapmap];0.85[EUR][1000 genomes]
rs3099945	0.84[CEU][hapmap]
rs3099946	0.80[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs3099955	0.93[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs3099956	1.00[CHB][hapmap];0.82[ASN][1000 genomes]
rs3099957	0.92[CEU][hapmap];0.86[JPT][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3099958	0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3099959	0.92[CEU][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3099998	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3100000	0.82[CHB][hapmap];0.90[YRI][hapmap];0.87[AFR][1000 genomes]
rs3112159	0.89[CHB][hapmap]
rs3112163	1.00[CHB][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes]
rs3112166	0.86[AFR][1000 genomes]
rs3112175	0.92[AFR][1000 genomes]
rs384007	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs384421	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs389023	0.86[EUR][1000 genomes]
rs3923144	0.89[CHB][hapmap]
rs434696	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4670266	0.91[CHB][hapmap]
rs4670268	0.96[CEU][hapmap];0.89[CHB][hapmap];0.86[JPT][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4670899	0.80[CEU][hapmap];0.87[EUR][1000 genomes]
rs4670900	0.90[AFR][1000 genomes];0.80[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs6544180	0.95[EUR][1000 genomes]
rs6706091	0.88[CEU][hapmap];0.94[EUR][1000 genomes]
rs6738069	0.96[CEU][hapmap];0.89[CHB][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6744514	0.84[CEU][hapmap];0.87[EUR][1000 genomes]
rs6754902	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7565111	1.00[CHB][hapmap]
rs8179664	0.88[CEU][hapmap];0.91[CHB][hapmap];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9808136	0.81[CEU][hapmap];0.87[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:39110200-39186800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr2:39120800-39132400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr2:39126800-39134000	Weak transcription	Aorta	Aorta

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