The 2.0 version of rSNPBase

Variant report

Variant rs11721224
Chromosome Location chr3:17114053-17114054
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17089400-17135000 Weak transcription Pancreas Pancrea
2 chr3:17089800-17116000 Weak transcription Thymus Thymus
3 chr3:17095400-17114400 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr3:17095400-17120600 Weak transcription Aorta Aorta
5 chr3:17095400-17120600 Weak transcription Lung lung
6 chr3:17096600-17118000 Weak transcription Fetal Intestine Small intestine
7 chr3:17097600-17120400 Weak transcription Spleen Spleen
8 chr3:17103400-17134400 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr3:17106800-17118200 Strong transcription Primary monocytes fromperipheralblood blood
10 chr3:17107000-17133400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr3:17107200-17114800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr3:17107200-17126200 Weak transcription Fetal Kidney kidney
13 chr3:17107600-17116400 Strong transcription Primary B cells from peripheral blood blood
14 chr3:17107600-17122800 Weak transcription Fetal Muscle Trunk muscle
15 chr3:17108200-17120600 Weak transcription Stomach Smooth Muscle stomach
16 chr3:17108600-17118600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr3:17109000-17117000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr3:17109800-17120800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr3:17110800-17132200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr3:17111000-17114600 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:17111400-17129400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:17111800-17114400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr3:17111800-17130600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr3:17112000-17115800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr3:17112000-17132000 Weak transcription Duodenum Mucosa Duodenum
26 chr3:17112200-17115800 Weak transcription Liver Liver
27 chr3:17112200-17116200 Strong transcription GM12878-XiMat blood
28 chr3:17112200-17118600 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:17112200-17137400 Weak transcription Brain Germinal Matrix brain
30 chr3:17112400-17115000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr3:17112400-17116000 Weak transcription Placenta Placenta
32 chr3:17112400-17118400 Weak transcription Right Atrium heart
33 chr3:17112600-17114200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr3:17112600-17114200 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr3:17112600-17115000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr3:17112600-17115200 Weak transcription Primary T cells fromperipheralblood blood
37 chr3:17112600-17115600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr3:17112600-17116000 Weak transcription Dnd41 blood
39 chr3:17112600-17116800 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr3:17112600-17118000 Weak transcription Psoas Muscle Psoas
41 chr3:17112600-17118600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr3:17112600-17118600 Weak transcription Fetal Heart heart
43 chr3:17112600-17120600 Weak transcription Gastric stomach
44 chr3:17112600-17120600 Weak transcription Ovary ovary
45 chr3:17112600-17120800 Weak transcription Adipose Nuclei Adipose
46 chr3:17112600-17123000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr3:17112600-17124000 Weak transcription Fetal Intestine Large intestine
48 chr3:17112600-17124600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr3:17112600-17126000 Weak transcription Fetal Brain Female brain
50 chr3:17112600-17127800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015