The 2.0 version of rSNPBase

Variant report

Variant rs62247183
Chromosome Location chr3:17075059-17075060
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:17053600-17076200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr3:17053600-17080600 Weak transcription Fetal Muscle Leg muscle
3 chr3:17053800-17086800 Weak transcription Fetal Stomach stomach
4 chr3:17055000-17077000 Weak transcription Fetal Brain Female brain
5 chr3:17055400-17088800 Weak transcription Thymus Thymus
6 chr3:17055600-17079800 Weak transcription Small Intestine intestine
7 chr3:17055800-17087800 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr3:17057400-17076200 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr3:17057600-17080600 Weak transcription Duodenum Mucosa Duodenum
10 chr3:17058600-17077000 Weak transcription Right Ventricle heart
11 chr3:17058600-17082400 Weak transcription Fetal Intestine Large intestine
12 chr3:17060000-17082200 Weak transcription Fetal Intestine Small intestine
13 chr3:17060000-17088600 Weak transcription Pancreas Pancrea
14 chr3:17060200-17081000 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr3:17065600-17081200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr3:17066600-17075600 Weak transcription Left Ventricle heart
17 chr3:17069400-17085600 Weak transcription Aorta Aorta
18 chr3:17069600-17080800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr3:17070000-17093600 Weak transcription Fetal Lung lung
20 chr3:17071400-17079800 Weak transcription Lung lung
21 chr3:17071400-17080600 Weak transcription Gastric stomach
22 chr3:17071600-17075600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:17071800-17080600 Weak transcription Primary T cells fromperipheralblood blood
24 chr3:17072200-17079800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr3:17072800-17076200 Weak transcription Primary B cells from peripheral blood blood
26 chr3:17072800-17080200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr3:17072800-17080600 Weak transcription Esophagus oesophagus
28 chr3:17072800-17085600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr3:17073000-17075200 Weak transcription Fetal Thymus thymus
30 chr3:17073000-17077200 Weak transcription Ovary ovary
31 chr3:17073000-17078400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr3:17073000-17080200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr3:17073000-17088800 Weak transcription Right Atrium heart
34 chr3:17073000-17093000 Weak transcription Spleen Spleen
35 chr3:17073200-17075200 Weak transcription GM12878-XiMat blood
36 chr3:17073200-17076400 Weak transcription Psoas Muscle Psoas
37 chr3:17073200-17077000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:17073200-17080600 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr3:17073200-17085200 Weak transcription Placenta Placenta
40 chr3:17073200-17085400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr3:17073600-17076400 Weak transcription Primary B cells from cord blood blood
42 chr3:17073800-17076600 Enhancers Primary T cells from cord blood blood
43 chr3:17074000-17077000 Enhancers Monocytes-CD14+_RO01746 blood
44 chr3:17074000-17077200 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr3:17074000-17077200 Enhancers Fetal Heart heart
46 chr3:17074000-17077400 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr3:17074000-17084400 Weak transcription Liver Liver
48 chr3:17074200-17077400 Enhancers Primary neutrophils fromperipheralblood blood
49 chr3:17074400-17075800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:17074400-17075800 Enhancers Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015