Variant report

Variant	rs11773591
Chromosome Location	chr7:116693810-116693811
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116683661..116685296-chr7:116691714..116693908,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11762032	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs11764134	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12706125	1.00[CHB][hapmap];0.86[JPT][hapmap]
rs12706126	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12706134	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12706135	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12706136	0.85[ASN][1000 genomes]
rs12706137	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12706138	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12706139	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs12706140	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12706141	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12706143	1.00[CHB][hapmap]
rs12706144	1.00[CHB][hapmap]
rs13222576	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13222912	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13224314	1.00[CHB][hapmap]
rs13239447	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs13308921	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2188693	1.00[CHB][hapmap]
rs34042687	0.87[ASN][1000 genomes]
rs3808218	1.00[CHB][hapmap]
rs3808222	1.00[CHB][hapmap]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116686600-116701200	Weak transcription	HSMMtube	muscle
2	chr7:116686800-116712400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:116688000-116694600	Weak transcription	Brain Germinal Matrix	brain
4	chr7:116688000-116697000	Weak transcription	Fetal Lung	lung
5	chr7:116690600-116701200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr7:116690600-116711600	Weak transcription	K562	blood
7	chr7:116691200-116694400	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr7:116691800-116702000	Weak transcription	Pancreas	Pancrea
9	chr7:116692000-116696200	Weak transcription	Spleen	Spleen
10	chr7:116692200-116702000	Weak transcription	Psoas Muscle	Psoas
11	chr7:116692400-116704600	Weak transcription	GM12878-XiMat	blood
12	chr7:116693000-116694800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr7:116693200-116694600	Enhancers	Brain Angular Gyrus	brain
14	chr7:116693400-116694000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr7:116693400-116694600	Enhancers	Brain Anterior Caudate	brain
16	chr7:116693400-116694600	Enhancers	Left Ventricle	heart
17	chr7:116693400-116694600	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr7:116693400-116694800	Enhancers	Aorta	Aorta
19	chr7:116693600-116701200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr7:116693800-116694200	Weak transcription	Brain Hippocampus Middle	brain
21	chr7:116693800-116696000	Weak transcription	Ovary	ovary
22	chr7:116693800-116701200	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr7:116693800-116709000	Weak transcription	Right Atrium	heart

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