Variant report

Variant	rs11762032
Chromosome Location	chr7:116669695-116669696
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:116666668..116671169-chr7:116672583..116677847,7	K562	blood:
2	chr7:116663523..116665031-chr7:116668004..116669700,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11764134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11765198	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs11773591	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs12706124	0.87[EUR][1000 genomes]
rs12706125	0.86[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12706126	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12706127	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12706134	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12706135	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12706136	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12706137	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12706138	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12706139	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12706140	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12706141	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs12706143	1.00[CHB][hapmap]
rs12706144	1.00[CHB][hapmap]
rs13222576	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs13222912	0.86[ASN][1000 genomes]
rs13224314	1.00[CHB][hapmap]
rs13235739	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13239447	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13243111	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13308921	1.00[CHB][hapmap];0.86[ASN][1000 genomes]
rs2188693	1.00[CHB][hapmap]
rs34042687	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3808218	1.00[CHB][hapmap]
rs3808222	1.00[CHB][hapmap]
rs66758829	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71544773	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:116661600-116670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr7:116662000-116675200	Weak transcription	Fetal Stomach	stomach
3	chr7:116663600-116670600	Weak transcription	Fetal Lung	lung
4	chr7:116664000-116670800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr7:116665400-116670400	Weak transcription	Brain Hippocampus Middle	brain
6	chr7:116665800-116680600	Weak transcription	Osteobl	bone
7	chr7:116666200-116680400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:116666800-116673800	Weak transcription	Pancreas	Pancrea
9	chr7:116667000-116671200	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr7:116667000-116671200	Weak transcription	Fetal Brain Male	brain
11	chr7:116667000-116673800	Weak transcription	Right Atrium	heart
12	chr7:116667000-116674000	Weak transcription	HUVEC	blood vessel
13	chr7:116667000-116681000	Weak transcription	NH-A	brain
14	chr7:116667200-116669800	Weak transcription	Fetal Heart	heart
15	chr7:116667200-116671200	Weak transcription	NHDF-Ad	bronchial
16	chr7:116667200-116676000	Weak transcription	K562	blood
17	chr7:116667200-116680800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr7:116669400-116674400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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