The 2.0 version of rSNPBase

Variant report

Variant rs11806492
Chromosome Location chr1:197722857-197722858
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
4 chr1:197706600-197729400 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:197706800-197741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:197708400-197729800 Weak transcription NHEK skin
7 chr1:197709800-197723000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:197710400-197724000 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr1:197712200-197731000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr1:197712200-197741600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:197712200-197742000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:197713000-197732800 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr1:197713000-197734000 Weak transcription Fetal Thymus thymus
14 chr1:197713800-197733000 Weak transcription Aorta Aorta
15 chr1:197714400-197731600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:197714400-197743800 Weak transcription Spleen Spleen
17 chr1:197714600-197726400 Weak transcription Right Ventricle heart
18 chr1:197714600-197727400 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:197714600-197729800 Weak transcription Primary hematopoietic stem cells blood
20 chr1:197714600-197730000 Weak transcription Primary B cells from cord blood blood
21 chr1:197714600-197741600 Weak transcription Primary T cells fromperipheralblood blood
22 chr1:197714600-197742400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:197714600-197743600 Weak transcription Ovary ovary
24 chr1:197715000-197727200 Weak transcription Rectal Smooth Muscle rectum
25 chr1:197715400-197740000 Weak transcription Left Ventricle heart
26 chr1:197715400-197741800 Weak transcription Gastric stomach
27 chr1:197715600-197738400 Weak transcription Pancreas Pancrea
28 chr1:197716800-197731400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:197716800-197737000 Weak transcription Duodenum Mucosa Duodenum
30 chr1:197717000-197723200 Weak transcription Fetal Intestine Small intestine
31 chr1:197717000-197730400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:197717000-197737200 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:197717800-197727400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:197718400-197732000 Weak transcription K562 blood
35 chr1:197718400-197740200 Weak transcription NHDF-Ad bronchial
36 chr1:197718600-197741800 Weak transcription Osteobl bone
37 chr1:197719200-197743800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:197720000-197731200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:197720200-197725000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr1:197720200-197730800 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:197720200-197731400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr1:197720200-197740600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:197720400-197726400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:197720400-197728800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:197720400-197730400 Weak transcription Primary T cells from cord blood blood
46 chr1:197720600-197725400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:197720800-197724400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr1:197721200-197743000 Weak transcription Fetal Kidney kidney
49 chr1:197721600-197724200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:197722000-197724400 Strong transcription Dnd41 blood

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Last update: Aug 31, 2015