The 2.0 version of rSNPBase

Variant report

Variant rs6698391
Chromosome Location chr1:197706703-197706704
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197688000-197707400 Weak transcription Left Ventricle heart
2 chr1:197694800-197707400 Weak transcription Psoas Muscle Psoas
3 chr1:197695800-197708000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:197695800-197722000 Weak transcription Fetal Lung lung
5 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:197696000-197709200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:197696000-197716000 Weak transcription Duodenum Mucosa Duodenum
9 chr1:197697000-197709000 Weak transcription Primary T cells from cord blood blood
10 chr1:197698800-197708000 Weak transcription Lung lung
11 chr1:197699200-197707800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr1:197701000-197708000 Weak transcription Small Intestine intestine
13 chr1:197701800-197711800 Weak transcription Fetal Heart heart
14 chr1:197702000-197707600 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:197702000-197711600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:197702600-197714200 Weak transcription K562 blood
17 chr1:197702800-197713600 Weak transcription Primary B cells from peripheral blood blood
18 chr1:197702800-197713600 Weak transcription Primary hematopoietic stem cells blood
19 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
20 chr1:197703000-197709200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:197703000-197718400 Weak transcription Dnd41 blood
22 chr1:197703400-197708000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:197704400-197708000 Weak transcription Thymus Thymus
24 chr1:197705000-197707600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:197705000-197709800 Weak transcription HepG2 liver
26 chr1:197705000-197711800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:197705200-197706800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:197705200-197706800 Enhancers HMEC breast
29 chr1:197705200-197710000 Weak transcription Fetal Intestine Small intestine
30 chr1:197705400-197706800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:197705400-197707000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:197705400-197707200 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr1:197705400-197708000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:197705400-197708400 Enhancers NHEK skin
35 chr1:197705600-197708400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:197705800-197707400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:197706000-197706800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr1:197706000-197707200 Enhancers HUES48 Cell Line embryonic stem cell
39 chr1:197706000-197707800 Enhancers Pancreatic Islets Pancreatic Islet
40 chr1:197706200-197706800 Enhancers iPS-20b Cell Line embryonic stem cell
41 chr1:197706200-197706800 Enhancers NHDF-Ad bronchial
42 chr1:197706200-197710200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr1:197706200-197710600 Enhancers Primary T helper cells PMA-I stimulated --
44 chr1:197706400-197707400 Weak transcription Adipose Nuclei Adipose
45 chr1:197706400-197707400 Weak transcription Right Ventricle heart
46 chr1:197706400-197708000 Weak transcription Pancreas Pancrea
47 chr1:197706400-197709200 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr1:197706600-197707400 Enhancers Stomach Mucosa stomach
49 chr1:197706600-197708000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr1:197706600-197708000 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015