Variant report

No.	Distal block	Cell Line	Cell type
1	chr10:61695241..61697293-chr10:61702502..61705874,3	MCF-7	breast:
2	chr10:61665357..61667924-chr10:61701547..61705798,5	MCF-7	breast:
3	chr10:61703836..61706924-chr10:61718320..61719980,3	MCF-7	breast:
4	chr10:61703565..61709814-chr10:61724833..61727412,7	MCF-7	breast:
5	chr10:61665632..61668478-chr10:61702558..61705460,3	MCF-7	breast:
6	chr10:61702627..61705197-chr10:61707163..61708770,2	MCF-7	breast:
7	chr10:61702957..61706196-chr10:61723593..61729124,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000235931	Chromatin interaction
ENSG00000108091	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10994042	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs10994069	0.98[ASN][1000 genomes]
rs10994075	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10994076	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1171811	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1171822	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1171823	0.88[ASN][1000 genomes]
rs1171827	0.88[ASN][1000 genomes]
rs1180659	0.88[ASN][1000 genomes]
rs11819444	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs1184955	0.88[ASN][1000 genomes]
rs12243713	0.98[ASN][1000 genomes]
rs12254991	0.98[ASN][1000 genomes]
rs12256615	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12266575	0.85[CHB][hapmap]
rs12268832	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs12763974	1.00[CHB][hapmap]
rs12784462	0.80[ASN][1000 genomes]
rs1684889	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs1684914	0.85[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs6479671	1.00[ASN][1000 genomes]
rs7070679	0.95[ASN][1000 genomes]
rs7085413	1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61704200-61705600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr10:61704400-61705400	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr10:61704600-61705600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr10:61704800-61706600	Enhancers	H9 Cell Line	embryonic stem cell
5	chr10:61705000-61705800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr10:61705000-61706600	Enhancers	HUES6 Cell Line	embryonic stem cell
7	chr10:61705000-61706600	Enhancers	iPS-18 Cell Line	embryonic stem cell

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