Variant report

Variant	rs11965901
Chromosome Location	chr6:14013276-14013277
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:14012568..14015393-chr6:14015771..14017305,2	K562	blood:

Extended variants
information (count: 85 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:84)

rs_ID	r²[population]
rs10080702	1.00[EUR][1000 genomes]
rs10080734	1.00[EUR][1000 genomes]
rs10484346	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1192053	1.00[EUR][1000 genomes]
rs16874553	1.00[EUR][1000 genomes]
rs16874594	1.00[EUR][1000 genomes]
rs2068206	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs55694338	1.00[EUR][1000 genomes]
rs55875628	1.00[EUR][1000 genomes]
rs56132468	1.00[EUR][1000 genomes]
rs56297167	1.00[EUR][1000 genomes]
rs56820870	1.00[EUR][1000 genomes]
rs57376077	1.00[EUR][1000 genomes]
rs57707835	1.00[EUR][1000 genomes]
rs57891360	1.00[EUR][1000 genomes]
rs57916848	1.00[EUR][1000 genomes]
rs58191581	1.00[EUR][1000 genomes]
rs58548280	1.00[EUR][1000 genomes]
rs58587778	1.00[EUR][1000 genomes]
rs58618044	1.00[EUR][1000 genomes]
rs58736051	1.00[EUR][1000 genomes]
rs58793310	1.00[EUR][1000 genomes]
rs58864192	1.00[EUR][1000 genomes]
rs58883873	1.00[EUR][1000 genomes]
rs58920414	1.00[EUR][1000 genomes]
rs58930299	1.00[EUR][1000 genomes]
rs59177919	1.00[EUR][1000 genomes]
rs59297313	1.00[EUR][1000 genomes]
rs59442894	1.00[EUR][1000 genomes]
rs59777177	1.00[EUR][1000 genomes]
rs59928993	1.00[EUR][1000 genomes]
rs60371731	1.00[EUR][1000 genomes]
rs60744650	1.00[EUR][1000 genomes]
rs61291802	1.00[EUR][1000 genomes]
rs61417318	1.00[EUR][1000 genomes]
rs61466290	1.00[EUR][1000 genomes]
rs6902171	1.00[EUR][1000 genomes]
rs6902522	1.00[EUR][1000 genomes]
rs6911430	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6915720	1.00[EUR][1000 genomes]
rs6916720	1.00[EUR][1000 genomes]
rs6921389	1.00[EUR][1000 genomes]
rs6921513	1.00[EUR][1000 genomes]
rs6921779	1.00[EUR][1000 genomes]
rs6925050	1.00[EUR][1000 genomes]
rs6925589	1.00[EUR][1000 genomes]
rs6940950	1.00[EUR][1000 genomes]
rs73364380	1.00[EUR][1000 genomes]
rs73366305	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73366310	1.00[EUR][1000 genomes]
rs73366314	1.00[EUR][1000 genomes]
rs73366326	1.00[EUR][1000 genomes]
rs73366337	1.00[EUR][1000 genomes]
rs73369927	1.00[EUR][1000 genomes]
rs73369944	1.00[EUR][1000 genomes]
rs73369946	1.00[EUR][1000 genomes]
rs73369951	1.00[EUR][1000 genomes]
rs73373532	1.00[EUR][1000 genomes]
rs73373534	1.00[EUR][1000 genomes]
rs73723789	1.00[EUR][1000 genomes]
rs73723794	1.00[EUR][1000 genomes]
rs73723795	1.00[EUR][1000 genomes]
rs73723797	1.00[EUR][1000 genomes]
rs73723798	1.00[EUR][1000 genomes]
rs73723801	1.00[EUR][1000 genomes]
rs73724053	1.00[EUR][1000 genomes]
rs73726004	1.00[EUR][1000 genomes]
rs73726007	1.00[EUR][1000 genomes]
rs73726009	1.00[EUR][1000 genomes]
rs73726032	1.00[EUR][1000 genomes]
rs73726035	1.00[EUR][1000 genomes]
rs73726042	1.00[EUR][1000 genomes]
rs73726044	1.00[EUR][1000 genomes]
rs7757894	1.00[EUR][1000 genomes]
rs7759397	1.00[EUR][1000 genomes]
rs7759532	1.00[EUR][1000 genomes]
rs9464655	1.00[EUR][1000 genomes]
rs9464656	1.00[EUR][1000 genomes]
rs9464658	1.00[EUR][1000 genomes]
rs9476487	1.00[EUR][1000 genomes]
rs9476502	1.00[EUR][1000 genomes]
rs9476503	1.00[EUR][1000 genomes]
rs9476505	1.00[EUR][1000 genomes]
rs9476506	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv600996	chr6:13954632-14014793	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:14010400-14015800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:14013000-14015600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:14013200-14017000	Weak transcription	H9 Cell Line	embryonic stem cell

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