The 2.0 version of rSNPBase

Variant report

Variant rs12104380
Chromosome Location chr19:37827362-37827363
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:37826200-37829000 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr19:37826200-37853200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr19:37826400-37828000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr19:37826400-37828000 Weak transcription HSMM muscle
5 chr19:37826400-37829200 Weak transcription HSMMtube muscle
6 chr19:37826400-37831800 Weak transcription Ovary ovary
7 chr19:37826400-37832800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr19:37826400-37834600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr19:37826400-37835200 Weak transcription Aorta Aorta
10 chr19:37826400-37837800 Weak transcription H9 Cell Line embryonic stem cell
11 chr19:37826400-37838200 Weak transcription HUVEC blood vessel
12 chr19:37826600-37827400 Enhancers Right Atrium heart
13 chr19:37826600-37828000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr19:37826600-37829400 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr19:37826600-37830000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr19:37826600-37832000 Weak transcription Primary B cells from cord blood blood
17 chr19:37826600-37832000 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr19:37826600-37832200 Weak transcription NH-A brain
19 chr19:37826600-37834200 Weak transcription Muscle Satellite Cultured Cells --
20 chr19:37826600-37834400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr19:37826600-37834800 Weak transcription Primary B cells from peripheral blood blood
22 chr19:37826600-37835600 Weak transcription Osteobl bone
23 chr19:37826600-37838000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr19:37826600-37848800 Weak transcription Small Intestine intestine
25 chr19:37826600-37856200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr19:37826600-37861600 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr19:37826800-37827600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr19:37826800-37827600 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr19:37826800-37828000 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr19:37826800-37828000 Weak transcription Primary hematopoietic stem cells blood
31 chr19:37826800-37828000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr19:37826800-37828000 Weak transcription Fetal Brain Male brain
33 chr19:37826800-37828000 Weak transcription Fetal Muscle Trunk muscle
34 chr19:37826800-37829600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr19:37826800-37829600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr19:37826800-37829800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr19:37826800-37830600 Weak transcription Fetal Intestine Small intestine
38 chr19:37826800-37830800 Weak transcription Fetal Intestine Large intestine
39 chr19:37826800-37831200 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr19:37826800-37831800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr19:37826800-37831800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:37826800-37831800 Weak transcription Primary T helper naive cells from peripheral blood blood
43 chr19:37826800-37831800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr19:37826800-37832000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr19:37826800-37832000 Weak transcription Thymus Thymus
46 chr19:37826800-37832400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr19:37826800-37833800 Weak transcription Adipose Nuclei Adipose
48 chr19:37826800-37834400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr19:37826800-37834600 Weak transcription H1 Cell Line embryonic stem cell
50 chr19:37826800-37834800 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015