Variant report

Variant	rs13343471
Chromosome Location	chr19:37932130-37932131
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:37930059..37932507-chr19:37948156..37950930,2	MCF-7	breast:

Extended variants
information (count: 139 )
Associated
traits (count: 10 )

rSNPs within LD-proxies of this variant (count:134)

rs_ID	r²[population]
rs1015848	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1015849	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1035479	0.92[EUR][1000 genomes]
rs10403173	0.81[ASW][hapmap]
rs10403582	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10403613	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10404031	0.81[ASW][hapmap]
rs10404602	0.86[EUR][1000 genomes]
rs10404920	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10404945	0.93[CEU][hapmap];0.82[EUR][1000 genomes]
rs10405064	0.94[ASW][hapmap];1.00[CEU][hapmap];0.93[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.81[LWK][hapmap];0.86[MEX][hapmap];0.84[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10405325	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10405407	1.00[CEU][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs10406177	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes]
rs10406379	0.81[ASW][hapmap]
rs10407084	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10409204	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10411574	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10412043	0.83[EUR][1000 genomes]
rs10413602	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10414904	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs10415024	1.00[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.83[YRI][hapmap];0.86[EUR][1000 genomes]
rs10415358	0.86[EUR][1000 genomes]
rs10415937	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs10417503	0.94[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];0.89[JPT][hapmap];0.87[LWK][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10417844	0.93[CEU][hapmap];0.80[JPT][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs10420430	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10420722	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10420754	1.00[CEU][hapmap];0.94[JPT][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs10422074	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10422423	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10422667	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10422967	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10424574	0.94[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];0.89[JPT][hapmap];0.87[LWK][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.90[TSI][hapmap];0.96[YRI][hapmap];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10426618	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10426666	0.86[EUR][1000 genomes]
rs10426699	0.86[EUR][1000 genomes]
rs11083426	0.85[EUR][1000 genomes]
rs12104380	0.83[EUR][1000 genomes]
rs12104381	0.85[EUR][1000 genomes]
rs12709813	0.84[EUR][1000 genomes]
rs12972252	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12979470	0.97[EUR][1000 genomes]
rs12981532	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13343485	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13343502	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13345116	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs13345148	0.84[EUR][1000 genomes]
rs1373991	1.00[CEU][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.84[EUR][1000 genomes]
rs13744	0.81[ASW][hapmap]
rs1382357	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs1529957	0.86[CEU][hapmap]
rs1559229	1.00[CEU][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes]
rs1564208	0.81[ASW][hapmap]
rs16958863	0.81[ASW][hapmap]
rs1823061	0.85[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap]
rs2045908	0.91[EUR][1000 genomes]
rs2081096	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2112920	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2112922	0.90[EUR][1000 genomes]
rs2112923	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2126977	0.93[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs2279148	0.93[CEU][hapmap];0.84[EUR][1000 genomes]
rs2279149	0.81[ASW][hapmap];0.93[CEU][hapmap];0.93[GIH][hapmap];0.91[TSI][hapmap];0.84[EUR][1000 genomes]
rs2291002	0.81[ASW][hapmap]
rs2291004	0.87[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.93[MEX][hapmap];0.92[MKK][hapmap];0.91[TSI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2303131	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28373708	0.91[EUR][1000 genomes]
rs28402338	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28538699	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28605784	0.89[EUR][1000 genomes]
rs28623164	0.97[EUR][1000 genomes]
rs2891699	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs35085437	0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35540940	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35777021	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3745765	1.00[CEU][hapmap];0.84[JPT][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs3760825	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs3803895	0.92[EUR][1000 genomes]
rs3829688	0.81[ASW][hapmap]
rs4417644	0.93[ASW][hapmap];1.00[CEU][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];0.89[JPT][hapmap];0.87[LWK][hapmap];0.86[MEX][hapmap];0.90[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4452075	1.00[CEU][hapmap];0.94[JPT][hapmap];0.95[TSI][hapmap];0.86[EUR][1000 genomes]
rs4801759	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4801803	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4802024	0.81[ASW][hapmap]
rs4802766	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4802889	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4803210	0.82[CEU][hapmap]
rs4803229	1.00[CEU][hapmap];0.94[JPT][hapmap];0.95[TSI][hapmap];0.88[EUR][1000 genomes]
rs4803347	0.84[EUR][1000 genomes]
rs4803460	0.92[EUR][1000 genomes]
rs4803539	0.92[EUR][1000 genomes]
rs4969487	0.87[EUR][1000 genomes]
rs59224125	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs62110394	0.83[EUR][1000 genomes]
rs6508711	0.84[EUR][1000 genomes]
rs6508716	0.83[EUR][1000 genomes]
rs6508719	1.00[CEU][hapmap];0.94[JPT][hapmap];0.85[EUR][1000 genomes]
rs6508732	0.93[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];0.95[TSI][hapmap];0.87[EUR][1000 genomes]
rs6508733	0.93[CEU][hapmap];0.94[JPT][hapmap];0.87[EUR][1000 genomes]
rs6508736	0.81[ASW][hapmap]
rs713256	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7246657	0.86[CEU][hapmap];0.80[JPT][hapmap]
rs7246993	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7247259	1.00[CEU][hapmap];0.84[JPT][hapmap];0.84[EUR][1000 genomes]
rs7248733	0.93[CEU][hapmap];0.85[GIH][hapmap];0.94[JPT][hapmap];0.91[TSI][hapmap];0.85[EUR][1000 genomes]
rs7252099	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7252325	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7252346	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs7253091	1.00[CEU][hapmap];0.87[GIH][hapmap];0.94[JPT][hapmap];1.00[TSI][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7253114	0.93[CEU][hapmap];0.87[GIH][hapmap];0.80[JPT][hapmap];1.00[TSI][hapmap];0.88[EUR][1000 genomes]
rs7255140	0.80[AFR][1000 genomes];0.90[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7255407	0.97[EUR][1000 genomes]
rs7255785	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7255952	0.93[CEU][hapmap];1.00[CHB][hapmap];0.93[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7255972	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];1.00[MEX][hapmap];0.89[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7255996	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7256130	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7257495	0.84[EUR][1000 genomes]
rs7257672	1.00[CEU][hapmap];0.80[JPT][hapmap];0.84[EUR][1000 genomes]
rs7258692	1.00[CEU][hapmap];0.81[CHB][hapmap];0.93[CHD][hapmap];0.93[GIH][hapmap];0.84[JPT][hapmap];0.84[MKK][hapmap];0.90[TSI][hapmap];0.86[EUR][1000 genomes]
rs7259968	0.84[EUR][1000 genomes]
rs73631095	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7408133	0.86[EUR][1000 genomes]
rs7408563	1.00[CEU][hapmap];0.81[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes]
rs8106839	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8109038	0.87[ASW][hapmap];0.93[CEU][hapmap];0.94[CHB][hapmap];0.89[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MEX][hapmap];0.83[MKK][hapmap];0.91[TSI][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8109632	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8111782	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8112610	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9304566	0.94[ASW][hapmap];1.00[CEU][hapmap];0.81[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];0.89[JPT][hapmap];0.87[LWK][hapmap];0.86[MEX][hapmap];0.91[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9676739	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9676967	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9917081	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv918028	chr19:37020645-38014526	Weak transcription ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv2757695	chr19:37794850-38051606	Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	esv2758759	chr19:37794850-38051606	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
4	nsv1057688	chr19:37828019-37988253	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv833819	chr19:37899501-38051599	ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

mRNA abundance (count:10)

SNP	Gene	Cis/trans	Tissue	Source
rs13343471	DMPK	cis	parietal	SCAN
rs13343471	PAFAH1B3	cis	cerebellum	SCAN
rs13343471	FAM98C	cis	cerebellum	SCAN
rs13343471	LTBP4	cis	cerebellum	SCAN
rs13343471	EXOSC5	cis	cerebellum	SCAN
rs13343471	LIPE	cis	cerebellum	SCAN
rs13343471	PLEKHG2	cis	cerebellum	SCAN
rs13343471	MEGF8	cis	cerebellum	SCAN
rs13343471	CBLC	cis	parietal	SCAN
rs13343471	BLVRB	cis	cerebellum	SCAN

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:37898000-37956400	ZNF genes & repeats	Liver	Liver
2	chr19:37903200-37936600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr19:37903400-37936400	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
4	chr19:37906800-37936600	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
5	chr19:37910800-37956000	ZNF genes & repeats	Adipose Nuclei	Adipose
6	chr19:37911200-37936600	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
7	chr19:37911200-37936600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
8	chr19:37911200-37954600	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
9	chr19:37924400-37932800	Weak transcription	Osteobl	bone
10	chr19:37925000-37943400	Weak transcription	HSMM	muscle
11	chr19:37927600-37936600	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
12	chr19:37927800-37936200	ZNF genes & repeats	Dnd41	blood
13	chr19:37927800-37936400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr19:37927800-37936600	ZNF genes & repeats	Primary T cells from cord blood	blood
15	chr19:37927800-37937200	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
16	chr19:37928000-37934000	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
17	chr19:37928000-37936200	ZNF genes & repeats	Brain Germinal Matrix	brain
18	chr19:37928000-37936400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr19:37928000-37937000	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr19:37928200-37933800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr19:37928400-37936600	ZNF genes & repeats	Brain Hippocampus Middle	brain
22	chr19:37928600-37936000	ZNF genes & repeats	Fetal Lung	lung
23	chr19:37928600-37936200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr19:37928800-37934600	ZNF genes & repeats	Ovary	ovary
25	chr19:37928800-37935800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
26	chr19:37928800-37936000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
27	chr19:37928800-37936200	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr19:37928800-37936200	ZNF genes & repeats	Brain Anterior Caudate	brain
29	chr19:37928800-37936400	ZNF genes & repeats	Brain Substantia Nigra	brain
30	chr19:37928800-37936800	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
31	chr19:37928800-37937200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr19:37928800-37938600	ZNF genes & repeats	Fetal Brain Female	brain
33	chr19:37929000-37933600	ZNF genes & repeats	Fetal Kidney	kidney
34	chr19:37929000-37935200	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
35	chr19:37929000-37935400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
36	chr19:37929000-37936200	ZNF genes & repeats	Primary B cells from cord blood	blood
37	chr19:37929000-37936400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
38	chr19:37929000-37936800	ZNF genes & repeats	Primary hematopoietic stem cells	blood
39	chr19:37929200-37936200	ZNF genes & repeats	Brain Angular Gyrus	brain
40	chr19:37929400-37932200	Weak transcription	Esophagus	oesophagus
41	chr19:37930000-37933400	Strong transcription	Thymus	Thymus
42	chr19:37930000-37936000	ZNF genes & repeats	Fetal Muscle Trunk	muscle
43	chr19:37930000-37936200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
44	chr19:37930200-37932200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr19:37930200-37932200	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
46	chr19:37930200-37932200	Weak transcription	Fetal Stomach	stomach
47	chr19:37930200-37933600	ZNF genes & repeats	Primary T cells effector/memory enriched fromperipheralblood	blood
48	chr19:37930200-37934600	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
49	chr19:37930200-37935600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
50	chr19:37930200-37936000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links