The 2.0 version of rSNPBase

Variant report

Variant rs12247942
Chromosome Location chr10:93188592-93188593
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:93170800-93204600 Weak transcription Gastric stomach
2 chr10:93171000-93195000 Weak transcription Left Ventricle heart
3 chr10:93171800-93203200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr10:93172200-93195200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr10:93173200-93194800 Weak transcription Brain Germinal Matrix brain
6 chr10:93174600-93198000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr10:93175000-93192600 Weak transcription Fetal Kidney kidney
8 chr10:93175000-93204200 Weak transcription Fetal Brain Male brain
9 chr10:93175000-93205400 Weak transcription Aorta Aorta
10 chr10:93175000-93208800 Weak transcription Adipose Nuclei Adipose
11 chr10:93176600-93204000 Weak transcription Brain Anterior Caudate brain
12 chr10:93176600-93205400 Weak transcription Duodenum Mucosa Duodenum
13 chr10:93176600-93212600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr10:93176800-93196800 Weak transcription Brain Angular Gyrus brain
15 chr10:93176800-93199800 Weak transcription Colon Smooth Muscle Colon
16 chr10:93176800-93203600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr10:93180800-93193000 Weak transcription HUVEC blood vessel
18 chr10:93180800-93194600 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr10:93180800-93203200 Weak transcription H1 Cell Line embryonic stem cell
20 chr10:93181000-93191600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr10:93181000-93195000 Weak transcription Hela-S3 cervix
22 chr10:93181200-93193600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr10:93181200-93195000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr10:93181200-93197000 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr10:93182200-93207200 Weak transcription Stomach Smooth Muscle stomach
26 chr10:93184000-93203800 Weak transcription Brain Hippocampus Middle brain
27 chr10:93184000-93205000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:93184200-93193600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr10:93184200-93195000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr10:93184400-93191800 Weak transcription Muscle Satellite Cultured Cells --
31 chr10:93184400-93193200 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr10:93184400-93193400 Weak transcription Osteobl bone
33 chr10:93184400-93226400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr10:93184600-93194000 Weak transcription HSMM muscle
35 chr10:93185000-93208800 Weak transcription Fetal Muscle Trunk muscle
36 chr10:93186000-93226800 Weak transcription Pancreas Pancrea
37 chr10:93186400-93191800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr10:93186600-93192000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr10:93186600-93192000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr10:93186600-93192000 Weak transcription Fetal Lung lung
41 chr10:93186600-93192000 Weak transcription Ovary ovary
42 chr10:93186600-93193400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr10:93186600-93196800 Weak transcription Dnd41 blood
44 chr10:93186600-93197800 Weak transcription Fetal Brain Female brain
45 chr10:93186600-93205600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015