Variant report

Variant rs12442697
Chromosome Location chr15:40856420-40856421
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40828000-40856600 Weak transcription Placenta Amnion Placenta Amnion
2 chr15:40831600-40856600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr15:40840000-40856600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr15:40846600-40856600 Weak transcription Aorta Aorta
5 chr15:40846600-40856600 Weak transcription Gastric stomach
6 chr15:40847400-40856600 Weak transcription H9 Cell Line embryonic stem cell
7 chr15:40848800-40856600 Weak transcription Lung lung
8 chr15:40849000-40856600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr15:40851800-40856600 Weak transcription Esophagus oesophagus
10 chr15:40855200-40856600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr15:40855200-40858000 Active TSS GM12878-XiMat blood
12 chr15:40855400-40856600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr15:40855600-40856600 Weak transcription Pancreas Pancrea
14 chr15:40855800-40857800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
15 chr15:40855800-40857800 Active TSS Pancreatic Islets Pancreatic Islet
16 chr15:40856000-40856600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr15:40856000-40857400 Active TSS HMEC breast
18 chr15:40856200-40856600 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr15:40856200-40856600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr15:40856200-40856600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
21 chr15:40856200-40856600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr15:40856200-40856600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
23 chr15:40856200-40856600 Flanking Active TSS Brain Germinal Matrix brain
24 chr15:40856200-40856600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
25 chr15:40856200-40856600 Flanking Active TSS Osteobl bone
26 chr15:40856200-40856800 Flanking Active TSS Primary B cells from peripheral blood blood
27 chr15:40856200-40856800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr15:40856200-40856800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr15:40856200-40856800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr15:40856200-40856800 Flanking Active TSS Fetal Muscle Leg muscle
31 chr15:40856200-40856800 Flanking Active TSS Skeletal Muscle Male skeletal muscle
32 chr15:40856200-40856800 Flanking Active TSS Hela-S3 cervix
33 chr15:40856200-40856800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr15:40856200-40857000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:40856200-40857000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
36 chr15:40856200-40857000 Flanking Active TSS Dnd41 blood
37 chr15:40856200-40857400 Active TSS HSMM muscle
38 chr15:40856200-40857600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:40856200-40857600 Active TSS Placenta Placenta
40 chr15:40856200-40857600 Active TSS NHLF lung
41 chr15:40856200-40857800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr15:40856200-40857800 Active TSS Colonic Mucosa Colon
43 chr15:40856200-40857800 Active TSS Right Ventricle heart
44 chr15:40856200-40857800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
45 chr15:40856200-40857800 Active TSS K562 blood
46 chr15:40856400-40856600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
47 chr15:40856400-40856600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
48 chr15:40856400-40856600 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr15:40856400-40856600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
50 chr15:40856400-40856600 Flanking Active TSS HUES6 Cell Line embryonic stem cell

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