The 2.0 version of rSNPBase

Variant report

Variant rs12481107
Chromosome Location chr20:13523471-13523472
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13485000-13543600 Weak transcription Small Intestine intestine
2 chr20:13492200-13567000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr20:13497800-13563400 Weak transcription Pancreas Pancrea
4 chr20:13503000-13537600 Weak transcription Psoas Muscle Psoas
5 chr20:13503000-13538200 Weak transcription Ovary ovary
6 chr20:13504200-13527000 Strong transcription Dnd41 blood
7 chr20:13506400-13558800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr20:13507800-13526200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr20:13508000-13527000 Weak transcription NHEK skin
10 chr20:13508000-13534000 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr20:13508000-13542000 Weak transcription Fetal Intestine Small intestine
12 chr20:13508000-13563600 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr20:13508200-13525000 Weak transcription A549 lung
14 chr20:13508200-13556400 Weak transcription Fetal Muscle Trunk muscle
15 chr20:13508400-13538000 Weak transcription HepG2 liver
16 chr20:13508400-13546600 Weak transcription Fetal Kidney kidney
17 chr20:13508400-13550400 Weak transcription GM12878-XiMat blood
18 chr20:13508400-13556000 Weak transcription HSMM muscle
19 chr20:13508400-13559600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr20:13508400-13563400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr20:13509000-13527200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr20:13509000-13528000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr20:13509200-13536200 Weak transcription Fetal Intestine Large intestine
24 chr20:13509200-13548200 Weak transcription Duodenum Mucosa Duodenum
25 chr20:13509200-13556000 Weak transcription Fetal Stomach stomach
26 chr20:13509600-13527200 Weak transcription Liver Liver
27 chr20:13509800-13526600 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr20:13509800-13536200 Weak transcription Fetal Muscle Leg muscle
29 chr20:13509800-13538600 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr20:13509800-13547400 Weak transcription Primary T cells fromperipheralblood blood
31 chr20:13512800-13548400 Weak transcription Left Ventricle heart
32 chr20:13512800-13556000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr20:13513000-13526800 Weak transcription Aorta Aorta
34 chr20:13513800-13547600 Weak transcription Primary hematopoietic stem cells blood
35 chr20:13514000-13532000 Weak transcription Primary B cells from cord blood blood
36 chr20:13514000-13536200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr20:13514400-13526200 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr20:13514400-13527000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr20:13514800-13536600 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr20:13514800-13541000 Weak transcription Primary B cells from peripheral blood blood
41 chr20:13514800-13546400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr20:13515000-13605600 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr20:13516400-13529000 Weak transcription Fetal Thymus thymus
44 chr20:13516600-13528600 Weak transcription Primary T cells from cord blood blood
45 chr20:13516600-13538200 Weak transcription Thymus Thymus

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015