Variant report
| Variant | rs12480977 |
|---|---|
| Chromosome Location | chr20:13401060-13401061 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:13364400-13415400 | Weak transcription | Right Ventricle | heart |
| 2 | chr20:13364600-13416800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 3 | chr20:13369000-13411200 | Strong transcription | Dnd41 | blood |
| 4 | chr20:13371400-13413600 | Weak transcription | Ovary | ovary |
| 5 | chr20:13374200-13417200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 6 | chr20:13374400-13410800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 7 | chr20:13374600-13405800 | Weak transcription | Fetal Stomach | stomach |
| 8 | chr20:13379000-13410200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 9 | chr20:13379200-13463000 | Weak transcription | HSMM | muscle |
| 10 | chr20:13390800-13403000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 11 | chr20:13391200-13403400 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr20:13392600-13421400 | Weak transcription | Psoas Muscle | Psoas |
| 13 | chr20:13392800-13415000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr20:13393800-13411000 | Weak transcription | Pancreas | Pancrea |
| 15 | chr20:13393800-13416800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr20:13394000-13403000 | Weak transcription | HMEC | breast |
| 17 | chr20:13394000-13415600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 18 | chr20:13394200-13406800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr20:13394200-13416800 | Weak transcription | Esophagus | oesophagus |
| 20 | chr20:13394200-13417200 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 21 | chr20:13395000-13415000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 22 | chr20:13395400-13411000 | Weak transcription | Spleen | Spleen |
| 23 | chr20:13395600-13416800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 24 | chr20:13395600-13477800 | Weak transcription | Gastric | stomach |
| 25 | chr20:13396000-13410600 | Weak transcription | GM12878-XiMat | blood |
| 26 | chr20:13396000-13415000 | Weak transcription | Brain Hippocampus Middle | brain |
| 27 | chr20:13396000-13417000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 28 | chr20:13397400-13421200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 29 | chr20:13397600-13410600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr20:13397800-13405400 | Weak transcription | Fetal Lung | lung |
| 31 | chr20:13397800-13414400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 32 | chr20:13397800-13415000 | Weak transcription | Adipose Nuclei | Adipose |
| 33 | chr20:13398000-13403200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 34 | chr20:13398000-13407400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 35 | chr20:13398000-13410800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 36 | chr20:13398000-13411000 | Weak transcription | Primary B cells from cord blood | blood |
| 37 | chr20:13398200-13403000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 38 | chr20:13398200-13403000 | Weak transcription | NHEK | skin |
| 39 | chr20:13398200-13403600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 40 | chr20:13398200-13404600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 41 | chr20:13398200-13405400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 42 | chr20:13398200-13406000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr20:13398200-13406000 | Weak transcription | Fetal Muscle Leg | muscle |
| 44 | chr20:13398200-13406000 | Weak transcription | Left Ventricle | heart |
| 45 | chr20:13398200-13409600 | Weak transcription | Fetal Thymus | thymus |
| 46 | chr20:13398200-13410000 | Weak transcription | Primary T cells from cord blood | blood |
| 47 | chr20:13398200-13410200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 48 | chr20:13398200-13410200 | Weak transcription | Thymus | Thymus |
| 49 | chr20:13398200-13410800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 50 | chr20:13398200-13411000 | Weak transcription | Lung | lung |
