The 2.0 version of rSNPBase

Variant report

Variant rs8119260
Chromosome Location chr20:13433287-13433288
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13379200-13463000 Weak transcription HSMM muscle
2 chr20:13395600-13477800 Weak transcription Gastric stomach
3 chr20:13403800-13435000 Weak transcription HMEC breast
4 chr20:13404400-13434800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr20:13404400-13434800 Weak transcription NHEK skin
6 chr20:13411400-13435000 Weak transcription Lung lung
7 chr20:13413600-13433400 Weak transcription Primary hematopoietic stem cells blood
8 chr20:13415400-13435000 Weak transcription Placenta Placenta
9 chr20:13415600-13433600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr20:13416000-13438200 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr20:13416200-13435000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr20:13416200-13436600 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr20:13416400-13434600 Weak transcription Fetal Thymus thymus
14 chr20:13420800-13444400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr20:13421800-13436600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr20:13421800-13450000 Weak transcription Fetal Lung lung
17 chr20:13422000-13460400 Weak transcription Primary B cells from cord blood blood
18 chr20:13422000-13461200 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr20:13422200-13435000 Weak transcription Aorta Aorta
20 chr20:13422400-13435200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr20:13423200-13433800 Weak transcription K562 blood
22 chr20:13424600-13435000 Weak transcription Fetal Muscle Leg muscle
23 chr20:13428200-13433600 Weak transcription Small Intestine intestine
24 chr20:13428200-13434600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr20:13428400-13433800 Weak transcription Duodenum Mucosa Duodenum
26 chr20:13428400-13448800 Weak transcription Thymus Thymus
27 chr20:13429800-13437000 Strong transcription Dnd41 blood
28 chr20:13430000-13467800 Weak transcription Ovary ovary
29 chr20:13430200-13433800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr20:13430200-13467800 Weak transcription Pancreas Pancrea
31 chr20:13430400-13442200 Weak transcription Stomach Smooth Muscle stomach
32 chr20:13430600-13435400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr20:13430600-13436000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr20:13430800-13433400 Weak transcription Primary B cells from peripheral blood blood
35 chr20:13431200-13433600 Weak transcription A549 lung
36 chr20:13431400-13436000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr20:13431600-13435200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr20:13431600-13445000 Weak transcription Adipose Nuclei Adipose
39 chr20:13431800-13435000 Weak transcription Primary T cells fromperipheralblood blood
40 chr20:13432000-13435400 Strong transcription Primary T cells from cord blood blood
41 chr20:13432200-13438400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr20:13432400-13448800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr20:13432600-13435200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr20:13432600-13437400 Enhancers Liver Liver
45 chr20:13432800-13434400 Enhancers HepG2 liver

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Last update: Aug 31, 2015