Variant report

Variant rs6105109
Chromosome Location chr20:13451450-13451451
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13379200-13463000 Weak transcription HSMM muscle
2 chr20:13395600-13477800 Weak transcription Gastric stomach
3 chr20:13422000-13460400 Weak transcription Primary B cells from cord blood blood
4 chr20:13422000-13461200 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr20:13430000-13467800 Weak transcription Ovary ovary
6 chr20:13430200-13467800 Weak transcription Pancreas Pancrea
7 chr20:13433800-13452200 Weak transcription Fetal Intestine Small intestine
8 chr20:13435400-13460400 Weak transcription Fetal Thymus thymus
9 chr20:13435400-13462000 Weak transcription Left Ventricle heart
10 chr20:13435600-13454200 Weak transcription Primary B cells from peripheral blood blood
11 chr20:13435600-13460600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr20:13436600-13458800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr20:13436600-13460800 Weak transcription Primary T cells from cord blood blood
14 chr20:13438400-13452600 Strong transcription Dnd41 blood
15 chr20:13442600-13461800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr20:13442600-13471600 Weak transcription Stomach Smooth Muscle stomach
17 chr20:13442800-13467800 Weak transcription Aorta Aorta
18 chr20:13443400-13461200 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr20:13444800-13452400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr20:13445000-13460200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr20:13445400-13467800 Weak transcription Fetal Stomach stomach
22 chr20:13445600-13461000 Weak transcription Primary hematopoietic stem cells blood
23 chr20:13446200-13460800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr20:13450200-13460400 Weak transcription Fetal Lung lung
25 chr20:13450200-13461000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr20:13450200-13461800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr20:13450400-13452000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
28 chr20:13450400-13457600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr20:13450400-13461000 Weak transcription HepG2 liver
30 chr20:13450400-13461200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr20:13450800-13461200 Weak transcription Breast Myoepithelial Primary Cells Breast

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