The 2.0 version of rSNPBase

Variant report

Variant rs6033708
Chromosome Location chr20:13411140-13411141
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13364400-13415400 Weak transcription Right Ventricle heart
2 chr20:13364600-13416800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr20:13369000-13411200 Strong transcription Dnd41 blood
4 chr20:13371400-13413600 Weak transcription Ovary ovary
5 chr20:13374200-13417200 Weak transcription Fetal Muscle Trunk muscle
6 chr20:13379200-13463000 Weak transcription HSMM muscle
7 chr20:13392600-13421400 Weak transcription Psoas Muscle Psoas
8 chr20:13392800-13415000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr20:13393800-13416800 Weak transcription Rectal Smooth Muscle rectum
10 chr20:13394000-13415600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr20:13394200-13416800 Weak transcription Esophagus oesophagus
12 chr20:13394200-13417200 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr20:13395000-13415000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr20:13395600-13416800 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr20:13395600-13477800 Weak transcription Gastric stomach
16 chr20:13396000-13415000 Weak transcription Brain Hippocampus Middle brain
17 chr20:13396000-13417000 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr20:13397400-13421200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr20:13397800-13414400 Weak transcription Duodenum Mucosa Duodenum
20 chr20:13397800-13415000 Weak transcription Adipose Nuclei Adipose
21 chr20:13398200-13412000 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr20:13398200-13414600 Weak transcription Primary T cells fromperipheralblood blood
23 chr20:13398200-13415000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr20:13398200-13415000 Weak transcription Aorta Aorta
25 chr20:13398200-13415000 Weak transcription Fetal Intestine Small intestine
26 chr20:13398200-13415000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr20:13398200-13415000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr20:13398200-13416800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr20:13398200-13417800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr20:13399800-13430800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr20:13403800-13435000 Weak transcription HMEC breast
32 chr20:13404400-13434800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr20:13404400-13434800 Weak transcription NHEK skin
34 chr20:13405400-13415000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr20:13405400-13417200 Weak transcription Small Intestine intestine
36 chr20:13406400-13415200 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr20:13406600-13414600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr20:13406800-13413800 Weak transcription Fetal Lung lung
39 chr20:13406800-13417400 Weak transcription Colon Smooth Muscle Colon
40 chr20:13407800-13417200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr20:13408000-13417400 Weak transcription Fetal Brain Female brain
42 chr20:13408000-13419600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr20:13408200-13412000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr20:13408400-13417000 Weak transcription Brain Anterior Caudate brain
45 chr20:13408800-13416800 Weak transcription Colonic Mucosa Colon
46 chr20:13409000-13416800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr20:13409000-13419600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr20:13409200-13417400 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr20:13409600-13412000 Genic enhancers HepG2 liver
50 chr20:13409600-13416400 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015