The 2.0 version of rSNPBase

Variant report

Variant rs6033690
Chromosome Location chr20:13376646-13376647
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13362600-13376800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr20:13362800-13380600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr20:13363200-13377400 Weak transcription Fetal Brain Female brain
4 chr20:13364000-13377400 Weak transcription Brain Angular Gyrus brain
5 chr20:13364400-13415400 Weak transcription Right Ventricle heart
6 chr20:13364600-13379000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr20:13364600-13416800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr20:13364800-13377600 Weak transcription Rectal Smooth Muscle rectum
9 chr20:13367200-13378400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr20:13368600-13378400 Weak transcription GM12878-XiMat blood
11 chr20:13368600-13382400 Weak transcription HMEC breast
12 chr20:13368600-13397400 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr20:13368800-13392200 Weak transcription Aorta Aorta
14 chr20:13369000-13411200 Strong transcription Dnd41 blood
15 chr20:13369400-13377400 Weak transcription Colon Smooth Muscle Colon
16 chr20:13369400-13377600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr20:13369400-13380200 Weak transcription Psoas Muscle Psoas
18 chr20:13369400-13397000 Weak transcription Primary B cells from cord blood blood
19 chr20:13369400-13397200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr20:13369600-13397000 Weak transcription Fetal Thymus thymus
21 chr20:13370000-13378400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr20:13370000-13382400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr20:13371400-13413600 Weak transcription Ovary ovary
24 chr20:13371800-13397200 Weak transcription Primary T cells from cord blood blood
25 chr20:13372000-13382000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr20:13372000-13395800 Weak transcription HepG2 liver
27 chr20:13372000-13396400 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr20:13372000-13397400 Weak transcription Primary B cells from peripheral blood blood
29 chr20:13372000-13397400 Weak transcription Left Ventricle heart
30 chr20:13372000-13397400 Weak transcription Thymus Thymus
31 chr20:13372200-13381400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr20:13374200-13380600 Weak transcription Spleen Spleen
33 chr20:13374200-13417200 Weak transcription Fetal Muscle Trunk muscle
34 chr20:13374400-13380400 Weak transcription Fetal Lung lung
35 chr20:13374400-13382400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr20:13374400-13382800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr20:13374400-13384000 Weak transcription Pancreas Pancrea
38 chr20:13374400-13410800 Weak transcription Primary hematopoietic stem cells blood
39 chr20:13374600-13397400 Weak transcription Fetal Intestine Small intestine
40 chr20:13374600-13399400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr20:13374600-13405800 Weak transcription Fetal Stomach stomach
42 chr20:13375800-13377600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr20:13375800-13378800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr20:13375800-13379200 Enhancers HSMM muscle
45 chr20:13375800-13379400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr20:13376000-13376800 Enhancers NHDF-Ad bronchial
47 chr20:13376000-13379200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr20:13376400-13376800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr20:13376400-13378800 Enhancers HSMMtube muscle
50 chr20:13376400-13379000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015