Variant report

Variant rs6105097
Chromosome Location chr20:13414776-13414777
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13364400-13415400 Weak transcription Right Ventricle heart
2 chr20:13364600-13416800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr20:13374200-13417200 Weak transcription Fetal Muscle Trunk muscle
4 chr20:13379200-13463000 Weak transcription HSMM muscle
5 chr20:13392600-13421400 Weak transcription Psoas Muscle Psoas
6 chr20:13392800-13415000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr20:13393800-13416800 Weak transcription Rectal Smooth Muscle rectum
8 chr20:13394000-13415600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr20:13394200-13416800 Weak transcription Esophagus oesophagus
10 chr20:13394200-13417200 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr20:13395000-13415000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr20:13395600-13416800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr20:13395600-13477800 Weak transcription Gastric stomach
14 chr20:13396000-13415000 Weak transcription Brain Hippocampus Middle brain
15 chr20:13396000-13417000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr20:13397400-13421200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr20:13397800-13415000 Weak transcription Adipose Nuclei Adipose
18 chr20:13398200-13415000 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr20:13398200-13415000 Weak transcription Aorta Aorta
20 chr20:13398200-13415000 Weak transcription Fetal Intestine Small intestine
21 chr20:13398200-13415000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr20:13398200-13415000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr20:13398200-13416800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr20:13398200-13417800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr20:13399800-13430800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr20:13403800-13435000 Weak transcription HMEC breast
27 chr20:13404400-13434800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr20:13404400-13434800 Weak transcription NHEK skin
29 chr20:13405400-13415000 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr20:13405400-13417200 Weak transcription Small Intestine intestine
31 chr20:13406400-13415200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr20:13406800-13417400 Weak transcription Colon Smooth Muscle Colon
33 chr20:13407800-13417200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr20:13408000-13417400 Weak transcription Fetal Brain Female brain
35 chr20:13408000-13419600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr20:13408400-13417000 Weak transcription Brain Anterior Caudate brain
37 chr20:13408800-13416800 Weak transcription Colonic Mucosa Colon
38 chr20:13409000-13416800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr20:13409000-13419600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr20:13409200-13417400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr20:13409600-13416400 Strong transcription Fetal Thymus thymus
42 chr20:13410000-13415000 Weak transcription H9 Cell Line embryonic stem cell
43 chr20:13410000-13421600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr20:13410600-13417400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr20:13411200-13415000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr20:13411200-13415000 Weak transcription Liver Liver
47 chr20:13411200-13415200 Weak transcription Pancreas Pancrea
48 chr20:13411400-13415000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr20:13411400-13415000 Weak transcription Thymus Thymus
50 chr20:13411400-13415200 Weak transcription Spleen Spleen

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