Variant report

Variant rs6042111
Chromosome Location chr20:13426929-13426930
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:13379200-13463000 Weak transcription HSMM muscle
2 chr20:13395600-13477800 Weak transcription Gastric stomach
3 chr20:13399800-13430800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr20:13403800-13435000 Weak transcription HMEC breast
5 chr20:13404400-13434800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr20:13404400-13434800 Weak transcription NHEK skin
7 chr20:13411400-13435000 Weak transcription Lung lung
8 chr20:13413600-13433400 Weak transcription Primary hematopoietic stem cells blood
9 chr20:13415200-13428000 Weak transcription Thymus Thymus
10 chr20:13415400-13435000 Weak transcription Placenta Placenta
11 chr20:13415600-13433600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr20:13416000-13438200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr20:13416200-13435000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr20:13416200-13436600 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr20:13416400-13434600 Weak transcription Fetal Thymus thymus
16 chr20:13420800-13444400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr20:13421800-13432800 Weak transcription Psoas Muscle Psoas
18 chr20:13421800-13436600 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr20:13421800-13450000 Weak transcription Fetal Lung lung
20 chr20:13422000-13460400 Weak transcription Primary B cells from cord blood blood
21 chr20:13422000-13461200 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr20:13422200-13435000 Weak transcription Aorta Aorta
23 chr20:13422400-13432000 Weak transcription Primary T cells from cord blood blood
24 chr20:13422400-13435200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr20:13422600-13431000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr20:13423000-13428200 Strong transcription Dnd41 blood
27 chr20:13423200-13433800 Weak transcription K562 blood
28 chr20:13423800-13431800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr20:13424600-13435000 Weak transcription Fetal Muscle Leg muscle
30 chr20:13425000-13428000 Weak transcription HepG2 liver

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