Variant report
| Variant | rs12480285 |
|---|---|
| Chromosome Location | chr20:13367535-13367536 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:13360200-13368200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr20:13361800-13369400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 3 | chr20:13362400-13368200 | Weak transcription | Primary B cells from cord blood | blood |
| 4 | chr20:13362400-13370600 | Weak transcription | HepG2 | liver |
| 5 | chr20:13362600-13374000 | Weak transcription | Fetal Lung | lung |
| 6 | chr20:13362600-13376800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 7 | chr20:13362800-13368000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 8 | chr20:13362800-13368200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 9 | chr20:13362800-13368400 | Weak transcription | A549 | lung |
| 10 | chr20:13362800-13368400 | Weak transcription | NHEK | skin |
| 11 | chr20:13362800-13380600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 12 | chr20:13363200-13377400 | Weak transcription | Fetal Brain Female | brain |
| 13 | chr20:13363400-13373200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr20:13363600-13375800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 15 | chr20:13363600-13375800 | Weak transcription | HSMMtube | muscle |
| 16 | chr20:13363800-13368000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 17 | chr20:13363800-13368800 | Weak transcription | Fetal Kidney | kidney |
| 18 | chr20:13363800-13373400 | Weak transcription | Liver | Liver |
| 19 | chr20:13363800-13376200 | Weak transcription | Fetal Muscle Leg | muscle |
| 20 | chr20:13364000-13368000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 21 | chr20:13364000-13368200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 22 | chr20:13364000-13377400 | Weak transcription | Brain Angular Gyrus | brain |
| 23 | chr20:13364200-13368400 | Weak transcription | HMEC | breast |
| 24 | chr20:13364400-13368600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 25 | chr20:13364400-13370800 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr20:13364400-13371000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 27 | chr20:13364400-13376400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 28 | chr20:13364400-13415400 | Weak transcription | Right Ventricle | heart |
| 29 | chr20:13364600-13367600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 30 | chr20:13364600-13368200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 31 | chr20:13364600-13368200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 32 | chr20:13364600-13368600 | Strong transcription | Dnd41 | blood |
| 33 | chr20:13364600-13371800 | Strong transcription | Primary T cells from cord blood | blood |
| 34 | chr20:13364600-13374200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 35 | chr20:13364600-13379000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 36 | chr20:13364600-13416800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 37 | chr20:13364800-13368400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 38 | chr20:13364800-13375400 | Weak transcription | Colonic Mucosa | Colon |
| 39 | chr20:13364800-13377600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 40 | chr20:13365200-13367600 | Weak transcription | Fetal Thymus | thymus |
| 41 | chr20:13365400-13368400 | Weak transcription | GM12878-XiMat | blood |
| 42 | chr20:13365400-13373000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 43 | chr20:13365400-13375800 | Weak transcription | HSMM | muscle |
| 44 | chr20:13365600-13367600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 45 | chr20:13365600-13368200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 46 | chr20:13365600-13369400 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 47 | chr20:13365600-13370400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 48 | chr20:13365600-13376000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 49 | chr20:13365800-13368600 | Strong transcription | Left Ventricle | heart |
| 50 | chr20:13366000-13368800 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
