Variant report

Variant	rs12718483
Chromosome Location	chr11:83464296-83464297
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs10501546	0.91[ASN][1000 genomes]
rs11233731	0.82[ASN][1000 genomes]
rs11233734	0.95[ASN][1000 genomes]
rs11233741	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1155508	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11600452	0.91[ASN][1000 genomes]
rs11605075	0.94[ASN][1000 genomes]
rs11605642	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11822921	0.93[ASN][1000 genomes]
rs12291851	0.93[ASN][1000 genomes]
rs12802930	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs13377566	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1451397	0.80[ASN][1000 genomes]
rs17146036	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17159816	0.95[ASN][1000 genomes]
rs17159818	0.95[ASN][1000 genomes]
rs17482520	0.89[ASN][1000 genomes]
rs17482676	0.83[ASN][1000 genomes]
rs17548333	0.91[ASN][1000 genomes]
rs1945309	0.93[ASN][1000 genomes]
rs2040307	0.82[ASN][1000 genomes]
rs2044864	0.82[ASN][1000 genomes]
rs35508643	0.82[ASN][1000 genomes]
rs56286239	0.82[ASN][1000 genomes]
rs57450388	0.89[ASN][1000 genomes]
rs57545594	0.83[ASN][1000 genomes]
rs57681765	0.99[ASN][1000 genomes]
rs6592139	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs66509934	0.91[ASN][1000 genomes]
rs66671165	0.91[ASN][1000 genomes]
rs66685127	0.80[ASN][1000 genomes]
rs66768024	0.91[ASN][1000 genomes]
rs67816311	0.80[ASN][1000 genomes]
rs7101642	0.89[ASN][1000 genomes]
rs7104950	0.93[ASN][1000 genomes]
rs7109065	0.99[ASN][1000 genomes]
rs7109609	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7111226	0.95[ASN][1000 genomes]
rs7116090	0.81[ASN][1000 genomes]
rs7119106	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7126086	0.88[ASN][1000 genomes]
rs72954544	0.91[ASN][1000 genomes]
rs72954555	0.95[ASN][1000 genomes]
rs72954570	0.91[ASN][1000 genomes]
rs72954588	0.80[ASN][1000 genomes]
rs72954590	0.80[ASN][1000 genomes]
rs7342211	0.87[ASN][1000 genomes]
rs7342212	0.85[ASN][1000 genomes]
rs73511043	0.99[ASN][1000 genomes]
rs7927526	0.91[ASN][1000 genomes]
rs7931407	0.82[ASN][1000 genomes]
rs7945102	0.93[ASN][1000 genomes]
rs7946060	0.92[ASN][1000 genomes]
rs7948831	0.95[ASN][1000 genomes]
rs7948906	0.85[ASN][1000 genomes]
rs7949241	0.87[ASN][1000 genomes]
rs7950988	0.80[ASN][1000 genomes]
rs921452	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3495715	chr11:83463604-83468952	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv2589653	chr11:83463955-83468471	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
3	esv3362540	chr11:83464004-83465952	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
4	esv3495710	chr11:83464004-83468952	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83460800-83471800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr11:83461200-83472000	Weak transcription	Brain Inferior Temporal Lobe	brain

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