Variant report

Variant	rs35508643
Chromosome Location	chr11:83427195-83427196
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10501545	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10792691	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10792692	0.91[ASN][1000 genomes]
rs10898148	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs10898149	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10898150	0.91[ASN][1000 genomes]
rs10898151	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10898152	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11233711	0.85[ASN][1000 genomes]
rs11233718	0.88[ASN][1000 genomes]
rs11233719	0.85[ASN][1000 genomes]
rs11233720	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11233721	0.86[ASN][1000 genomes]
rs11233722	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11233723	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11233724	0.93[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs11233725	0.91[ASN][1000 genomes]
rs11233726	0.91[ASN][1000 genomes]
rs11233730	0.91[ASN][1000 genomes]
rs11233731	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233734	0.80[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1155508	0.82[ASN][1000 genomes]
rs11600452	0.81[ASN][1000 genomes]
rs11604822	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11605075	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11605382	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11822921	0.83[ASN][1000 genomes]
rs12222455	0.88[ASN][1000 genomes]
rs12223210	0.91[ASN][1000 genomes]
rs12225388	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12225390	0.85[ASN][1000 genomes]
rs12225687	0.83[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs12291851	0.83[ASN][1000 genomes]
rs12718483	0.82[ASN][1000 genomes]
rs13377566	0.82[ASN][1000 genomes]
rs1451397	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs17159816	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17159818	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1945309	0.83[ASN][1000 genomes]
rs34258008	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57681765	0.80[ASN][1000 genomes]
rs633338	0.89[AFR][1000 genomes]
rs67463881	0.89[ASN][1000 genomes]
rs7101642	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7104950	0.83[ASN][1000 genomes]
rs7109065	0.80[ASN][1000 genomes]
rs7111226	0.84[ASN][1000 genomes]
rs7119106	0.82[ASN][1000 genomes]
rs73511043	0.80[ASN][1000 genomes]
rs7927165	0.90[ASN][1000 genomes]
rs7931407	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7931662	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7933581	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7933908	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7945102	0.83[ASN][1000 genomes]
rs7946060	0.86[ASN][1000 genomes]
rs7948831	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7949241	0.82[ASN][1000 genomes]
rs7950988	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83418000-83429000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:83419800-83429200	Enhancers	Hela-S3	cervix
3	chr11:83425200-83428800	Weak transcription	Brain Anterior Caudate	brain
4	chr11:83425200-83431600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:83425200-83431600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:83425200-83435000	Weak transcription	Brain Angular Gyrus	brain
7	chr11:83425200-83435000	Weak transcription	Brain Hippocampus Middle	brain
8	chr11:83425200-83435200	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr11:83425400-83435200	Weak transcription	Brain Cingulate Gyrus	brain
10	chr11:83425600-83428000	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr11:83426200-83428600	Weak transcription	Fetal Intestine Large	intestine

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