Variant report

Variant	rs10501545
Chromosome Location	chr11:83408962-83408963
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83407291..83409561-chr11:83411613..83413378,2	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10792691	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10792692	0.81[CEU][hapmap];0.91[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs10898148	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10898149	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10898150	0.85[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs10898151	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10898152	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11233711	0.80[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.84[ASN][1000 genomes]
rs11233718	0.86[ASN][1000 genomes]
rs11233719	0.89[ASN][1000 genomes]
rs11233720	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11233721	0.83[ASN][1000 genomes]
rs11233722	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11233723	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11233724	0.88[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11233725	0.88[ASN][1000 genomes]
rs11233726	0.86[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.88[ASN][1000 genomes]
rs11233730	0.86[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs11233731	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11233734	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11600452	0.80[AMR][1000 genomes]
rs11604822	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11605075	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11605382	0.86[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs12222455	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.91[ASN][1000 genomes]
rs12223210	0.86[CEU][hapmap];0.92[CHB][hapmap];0.84[JPT][hapmap];0.88[ASN][1000 genomes]
rs12225388	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs12225390	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.89[ASN][1000 genomes]
rs12225687	0.86[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1451397	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.81[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs17159816	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17159818	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1945309	0.84[JPT][hapmap]
rs34258008	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35508643	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs633338	0.84[AFR][1000 genomes]
rs645596	0.96[YRI][hapmap]
rs67463881	0.90[ASN][1000 genomes]
rs7101642	0.86[CEU][hapmap];0.82[CHB][hapmap];0.84[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7104950	0.84[JPT][hapmap]
rs7111226	0.84[JPT][hapmap];0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7927165	0.89[ASN][1000 genomes]
rs7931407	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7931662	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7933581	0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7933908	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7945102	0.84[JPT][hapmap]
rs7946060	0.85[CEU][hapmap];0.84[JPT][hapmap];0.85[YRI][hapmap];0.83[ASN][1000 genomes]
rs7948831	0.84[JPT][hapmap];0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7950988	0.85[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83402800-83409800	Weak transcription	Psoas Muscle	Psoas
2	chr11:83402800-83413000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr11:83403000-83409800	Weak transcription	Pancreas	Pancrea
4	chr11:83405400-83417400	Weak transcription	Hela-S3	cervix
5	chr11:83406000-83409800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr11:83406400-83411600	Weak transcription	Brain Hippocampus Middle	brain
7	chr11:83407000-83417600	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:83407200-83412600	Weak transcription	Brain Anterior Caudate	brain

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