Variant report

Variant	rs11233725
Chromosome Location	chr11:83421329-83421330
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10501545	0.88[ASN][1000 genomes]
rs10501546	0.80[ASN][1000 genomes]
rs10792691	0.85[ASN][1000 genomes]
rs10792692	0.80[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10898148	0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10898150	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10898151	0.99[ASN][1000 genomes]
rs10898152	0.99[ASN][1000 genomes]
rs11233711	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11233718	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11233719	0.81[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11233720	0.85[ASN][1000 genomes]
rs11233721	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11233722	0.99[ASN][1000 genomes]
rs11233723	0.99[ASN][1000 genomes]
rs11233724	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233726	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233730	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233731	0.91[ASN][1000 genomes]
rs11604822	0.85[ASN][1000 genomes]
rs11605382	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11822921	0.82[EUR][1000 genomes]
rs12222455	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12223210	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12225388	0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12225390	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12225687	0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1451397	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17548333	0.80[ASN][1000 genomes]
rs1945309	0.81[EUR][1000 genomes]
rs34258008	0.99[ASN][1000 genomes]
rs35508643	0.91[ASN][1000 genomes]
rs57545594	0.92[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs66509934	0.80[ASN][1000 genomes]
rs66671165	0.80[ASN][1000 genomes]
rs66768024	0.80[ASN][1000 genomes]
rs67463881	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7101642	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs72954544	0.80[ASN][1000 genomes]
rs72954570	0.80[ASN][1000 genomes]
rs7342211	0.82[ASN][1000 genomes]
rs7342212	0.83[ASN][1000 genomes]
rs7927165	0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7931407	0.91[ASN][1000 genomes]
rs7931662	0.99[ASN][1000 genomes]
rs7933581	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7933908	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7946060	0.95[EUR][1000 genomes]
rs7948906	0.96[EUR][1000 genomes]
rs7949241	0.94[EUR][1000 genomes]
rs7950988	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs921452	0.80[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83413200-83424400	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83418000-83429000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr11:83418800-83422200	Weak transcription	Pancreas	Pancrea
4	chr11:83419800-83429200	Enhancers	Hela-S3	cervix
5	chr11:83420000-83422000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:83420000-83422400	Weak transcription	Fetal Intestine Large	intestine
7	chr11:83420200-83424400	Weak transcription	Fetal Muscle Leg	muscle
8	chr11:83421000-83422000	Weak transcription	Fetal Intestine Small	intestine
9	chr11:83421200-83422200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr11:83421200-83424400	Weak transcription	Brain Angular Gyrus	brain

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