Variant report

Variant	rs17159818
Chromosome Location	chr11:83444750-83444751
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83443970..83446255-chr11:83446452..83448890,2	K562	blood:

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs10501545	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10501546	0.86[ASN][1000 genomes]
rs10792691	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10898149	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10898151	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11233720	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11233722	0.81[EUR][1000 genomes]
rs11233723	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11233731	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11233734	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233741	0.87[ASN][1000 genomes]
rs1155508	0.92[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11600452	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11604822	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11605075	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11605642	0.81[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs11822921	0.99[ASN][1000 genomes]
rs12291851	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12718483	0.95[ASN][1000 genomes]
rs12802930	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs13377566	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs1451397	0.83[ASN][1000 genomes]
rs17146036	0.85[ASN][1000 genomes]
rs17159816	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17482520	0.85[ASN][1000 genomes]
rs17548333	0.86[ASN][1000 genomes]
rs1945309	0.99[ASN][1000 genomes]
rs34258008	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35508643	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs57450388	0.85[ASN][1000 genomes]
rs57545594	0.88[ASN][1000 genomes]
rs57681765	0.93[ASN][1000 genomes]
rs6592139	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs66509934	0.86[ASN][1000 genomes]
rs66671165	0.86[ASN][1000 genomes]
rs66768024	0.86[ASN][1000 genomes]
rs7101642	0.92[ASN][1000 genomes]
rs7104950	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7109065	0.93[ASN][1000 genomes]
rs7109609	0.81[AFR][1000 genomes];0.86[ASN][1000 genomes]
rs7111226	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7119106	0.87[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs7126086	0.83[ASN][1000 genomes]
rs72954544	0.86[ASN][1000 genomes]
rs72954555	0.90[ASN][1000 genomes]
rs72954570	0.86[ASN][1000 genomes]
rs7342211	0.92[ASN][1000 genomes]
rs7342212	0.91[ASN][1000 genomes]
rs73511043	0.93[ASN][1000 genomes]
rs7927526	0.86[ASN][1000 genomes]
rs7931407	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7931662	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7945102	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs7946060	0.95[ASN][1000 genomes]
rs7948831	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7948906	0.87[ASN][1000 genomes]
rs7949241	0.90[ASN][1000 genomes]
rs7950988	0.83[ASN][1000 genomes]
rs921452	0.86[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83439800-83448000	Weak transcription	Brain Anterior Caudate	brain
2	chr11:83440000-83446600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr11:83440000-83446800	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr11:83440800-83446800	Weak transcription	Brain Angular Gyrus	brain
5	chr11:83440800-83447200	Weak transcription	Brain Hippocampus Middle	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links