The 2.0 version of rSNPBase

Variant report

Variant rs12729663
Chromosome Location chr1:212895751-212895752
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212894400-212897200 Enhancers Primary hematopoietic stem cells short term culture blood
2 chr1:212894600-212895800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr1:212894600-212895800 Enhancers Primary T helper cells PMA-I stimulated --
4 chr1:212894600-212895800 Flanking Active TSS A549 lung
5 chr1:212894600-212895800 Enhancers Hela-S3 cervix
6 chr1:212894600-212895800 Enhancers NHDF-Ad bronchial
7 chr1:212894600-212896000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr1:212894600-212896200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
9 chr1:212894600-212896200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:212894600-212896400 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr1:212894600-212896400 Enhancers HUVEC blood vessel
12 chr1:212894600-212897200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:212894600-212897200 Enhancers Dnd41 blood
14 chr1:212894800-212895800 Enhancers Stomach Mucosa stomach
15 chr1:212894800-212895800 Enhancers NHLF lung
16 chr1:212894800-212896000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
17 chr1:212895000-212896200 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:212895000-212896400 Enhancers Monocytes-CD14+_RO01746 blood
19 chr1:212895200-212922800 Weak transcription Left Ventricle heart
20 chr1:212895400-212895800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:212895400-212895800 Enhancers Small Intestine intestine
22 chr1:212895400-212896000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:212895400-212896800 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:212895400-212897400 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr1:212895400-212897400 Enhancers HepG2 liver
26 chr1:212895400-212899800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:212895400-212901800 Weak transcription Liver Liver
28 chr1:212895400-212902000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:212895400-212902400 Weak transcription Primary T cells from cord blood blood
30 chr1:212895400-212906000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr1:212895400-212906600 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:212895400-212912000 Weak transcription Primary T cells fromperipheralblood blood
33 chr1:212895400-212914600 Weak transcription Spleen Spleen
34 chr1:212895400-212916600 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr1:212895400-212917400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr1:212895400-212923200 Weak transcription Brain Cingulate Gyrus brain
37 chr1:212895400-212923400 Weak transcription Fetal Muscle Leg muscle
38 chr1:212895400-212923400 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:212895400-212926400 Weak transcription Esophagus oesophagus
40 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
41 chr1:212895600-212896000 Weak transcription Duodenum Mucosa Duodenum
42 chr1:212895600-212896200 Enhancers Primary neutrophils fromperipheralblood blood
43 chr1:212895600-212896200 Enhancers K562 blood
44 chr1:212895600-212897400 Weak transcription HSMM muscle
45 chr1:212895600-212899800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:212895600-212900000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:212895600-212900400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr1:212895600-212900400 Weak transcription Osteobl bone
49 chr1:212895600-212900600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:212895600-212900600 Weak transcription NH-A brain

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Last update: Aug 31, 2015