The 2.0 version of rSNPBase

Variant report

Variant rs73081902
Chromosome Location chr1:212948534-212948535
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
2 chr1:212895600-212964600 Weak transcription Gastric stomach
3 chr1:212901400-212954000 Weak transcription NH-A brain
4 chr1:212923600-212956200 Weak transcription H9 Cell Line embryonic stem cell
5 chr1:212923600-212963800 Weak transcription Brain Angular Gyrus brain
6 chr1:212923600-212964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:212923800-212957600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:212923800-212964200 Weak transcription HMEC breast
9 chr1:212924000-212954200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:212926600-212954200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:212926600-212963400 Weak transcription Rectal Smooth Muscle rectum
12 chr1:212926800-212954200 Weak transcription Hela-S3 cervix
13 chr1:212927400-212963400 Weak transcription Small Intestine intestine
14 chr1:212927400-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr1:212928400-212954000 Weak transcription Fetal Brain Male brain
16 chr1:212928400-212956200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr1:212928600-212954200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:212934200-212952400 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:212936600-212950600 Weak transcription Placenta Placenta
20 chr1:212936600-212954800 Weak transcription Left Ventricle heart
21 chr1:212936600-212956000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:212936600-212956200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:212936600-212956200 Weak transcription Thymus Thymus
24 chr1:212936600-212959800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:212936600-212960200 Weak transcription Lung lung
26 chr1:212936600-212964400 Weak transcription Esophagus oesophagus
27 chr1:212939400-212956200 Weak transcription Fetal Stomach stomach
28 chr1:212941200-212964200 Weak transcription Right Ventricle heart
29 chr1:212942400-212950400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:212942400-212964200 Weak transcription Aorta Aorta
31 chr1:212942600-212964400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:212942800-212956400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr1:212942800-212964200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:212943000-212954200 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr1:212943200-212953800 Weak transcription HSMM muscle
36 chr1:212943200-212954200 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:212943200-212954200 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr1:212943200-212956200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:212943200-212956200 Weak transcription Stomach Smooth Muscle stomach
40 chr1:212943200-212964200 Weak transcription Brain Inferior Temporal Lobe brain
41 chr1:212943600-212954000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr1:212943600-212957800 Weak transcription Brain Anterior Caudate brain
43 chr1:212943800-212949000 Strong transcription Dnd41 blood
44 chr1:212943800-212953800 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:212943800-212954800 Weak transcription Colon Smooth Muscle Colon
46 chr1:212943800-212955400 Weak transcription Fetal Muscle Trunk muscle
47 chr1:212944000-212954200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:212944000-212954600 Weak transcription Brain Hippocampus Middle brain
49 chr1:212944000-212956800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr1:212944000-212958000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015