The 2.0 version of rSNPBase

Variant report

Variant rs11811017
Chromosome Location chr1:212932987-212932988
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
2 chr1:212895600-212964600 Weak transcription Gastric stomach
3 chr1:212898800-212934000 Weak transcription Fetal Muscle Trunk muscle
4 chr1:212900400-212936200 Weak transcription Aorta Aorta
5 chr1:212901400-212954000 Weak transcription NH-A brain
6 chr1:212902200-212941800 Weak transcription Fetal Kidney kidney
7 chr1:212902600-212943600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:212908000-212933200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:212912000-212935800 Weak transcription K562 blood
10 chr1:212915400-212933400 Weak transcription Ovary ovary
11 chr1:212915400-212934400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:212915400-212936000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:212915400-212942000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:212922200-212939600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:212923600-212935400 Weak transcription Lung lung
16 chr1:212923600-212956200 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:212923600-212963800 Weak transcription Brain Angular Gyrus brain
18 chr1:212923600-212964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr1:212923800-212935800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:212923800-212935800 Weak transcription Placenta Placenta
21 chr1:212923800-212947200 Weak transcription A549 lung
22 chr1:212923800-212957600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr1:212923800-212964200 Weak transcription HMEC breast
24 chr1:212924000-212954200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:212926600-212933800 Weak transcription HSMM muscle
26 chr1:212926600-212939600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:212926600-212941800 Weak transcription Stomach Smooth Muscle stomach
28 chr1:212926600-212954200 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr1:212926600-212963400 Weak transcription Rectal Smooth Muscle rectum
30 chr1:212926800-212934000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:212926800-212936000 Weak transcription Esophagus oesophagus
32 chr1:212926800-212939600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr1:212926800-212940600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr1:212926800-212940800 Weak transcription NHLF lung
35 chr1:212926800-212942200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:212926800-212942400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:212926800-212942800 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:212926800-212942800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr1:212926800-212947800 Weak transcription NHDF-Ad bronchial
40 chr1:212926800-212948000 Weak transcription Osteobl bone
41 chr1:212926800-212954200 Weak transcription Hela-S3 cervix
42 chr1:212927000-212941800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr1:212927400-212942400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:212927400-212963400 Weak transcription Small Intestine intestine
45 chr1:212927400-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:212927800-212933200 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr1:212928200-212942400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:212928400-212933000 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:212928400-212933000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
50 chr1:212928400-212933000 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015