The 2.0 version of rSNPBase

Variant report

Variant rs6670648
Chromosome Location chr1:212942054-212942055
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
2 chr1:212895600-212964600 Weak transcription Gastric stomach
3 chr1:212901400-212954000 Weak transcription NH-A brain
4 chr1:212902600-212943600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:212923600-212956200 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:212923600-212963800 Weak transcription Brain Angular Gyrus brain
7 chr1:212923600-212964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr1:212923800-212947200 Weak transcription A549 lung
9 chr1:212923800-212957600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr1:212923800-212964200 Weak transcription HMEC breast
11 chr1:212924000-212954200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:212926600-212954200 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr1:212926600-212963400 Weak transcription Rectal Smooth Muscle rectum
14 chr1:212926800-212942200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:212926800-212942400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:212926800-212942800 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:212926800-212942800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr1:212926800-212947800 Weak transcription NHDF-Ad bronchial
19 chr1:212926800-212948000 Weak transcription Osteobl bone
20 chr1:212926800-212954200 Weak transcription Hela-S3 cervix
21 chr1:212927400-212942400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:212927400-212963400 Weak transcription Small Intestine intestine
23 chr1:212927400-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:212928200-212942400 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr1:212928400-212942200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:212928400-212942200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr1:212928400-212954000 Weak transcription Fetal Brain Male brain
28 chr1:212928400-212956200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:212928600-212942200 Weak transcription Brain Hippocampus Middle brain
30 chr1:212928600-212942400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr1:212928600-212942400 Weak transcription Brain Substantia Nigra brain
32 chr1:212928600-212947800 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr1:212928600-212954200 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:212929000-212947800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:212933800-212943000 Weak transcription Colonic Mucosa Colon
36 chr1:212934200-212952400 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:212936400-212942200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr1:212936400-212942200 Weak transcription Aorta Aorta
39 chr1:212936400-212942400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:212936600-212943000 Weak transcription K562 blood
41 chr1:212936600-212950600 Weak transcription Placenta Placenta
42 chr1:212936600-212954800 Weak transcription Left Ventricle heart
43 chr1:212936600-212956000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:212936600-212956200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:212936600-212956200 Weak transcription Thymus Thymus
46 chr1:212936600-212959800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:212936600-212960200 Weak transcription Lung lung
48 chr1:212936600-212964400 Weak transcription Esophagus oesophagus
49 chr1:212937000-212944800 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr1:212937400-212942200 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015