Variant report
| Variant | rs2174780 |
|---|---|
| Chromosome Location | chr1:212919407-212919408 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:212895200-212922800 | Weak transcription | Left Ventricle | heart |
| 2 | chr1:212895400-212923200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 3 | chr1:212895400-212923400 | Weak transcription | Fetal Muscle Leg | muscle |
| 4 | chr1:212895400-212923400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 5 | chr1:212895400-212926400 | Weak transcription | Esophagus | oesophagus |
| 6 | chr1:212895400-212964600 | Weak transcription | Pancreas | Pancrea |
| 7 | chr1:212895600-212923000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 8 | chr1:212895600-212923400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 9 | chr1:212895600-212964600 | Weak transcription | Gastric | stomach |
| 10 | chr1:212895800-212925600 | Weak transcription | Small Intestine | intestine |
| 11 | chr1:212895800-212926200 | Weak transcription | Hela-S3 | cervix |
| 12 | chr1:212898600-212923200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr1:212898800-212934000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr1:212899800-212926400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr1:212900400-212923200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr1:212900400-212927600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 17 | chr1:212900400-212932600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 18 | chr1:212900400-212936200 | Weak transcription | Aorta | Aorta |
| 19 | chr1:212901400-212954000 | Weak transcription | NH-A | brain |
| 20 | chr1:212901600-212923000 | Weak transcription | HSMM | muscle |
| 21 | chr1:212902200-212941800 | Weak transcription | Fetal Kidney | kidney |
| 22 | chr1:212902600-212943600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr1:212903000-212923400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 24 | chr1:212903200-212923400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 25 | chr1:212903600-212926400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 26 | chr1:212904200-212923200 | Weak transcription | Adipose Nuclei | Adipose |
| 27 | chr1:212904800-212926200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 28 | chr1:212905200-212923200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 29 | chr1:212905200-212923400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 30 | chr1:212905600-212923400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 31 | chr1:212906200-212923400 | Weak transcription | HMEC | breast |
| 32 | chr1:212906800-212923400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 33 | chr1:212908000-212933200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr1:212909400-212923200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 35 | chr1:212911000-212922800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 36 | chr1:212911600-212923000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 37 | chr1:212912000-212923200 | Weak transcription | Liver | Liver |
| 38 | chr1:212912000-212935800 | Weak transcription | K562 | blood |
| 39 | chr1:212912200-212925800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 40 | chr1:212913000-212923000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 41 | chr1:212913600-212923200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 42 | chr1:212913600-212923400 | Weak transcription | NHEK | skin |
| 43 | chr1:212914800-212923400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 44 | chr1:212915000-212925800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 45 | chr1:212915200-212920400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 46 | chr1:212915200-212923400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 47 | chr1:212915400-212923000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 48 | chr1:212915400-212923400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 49 | chr1:212915400-212923400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 50 | chr1:212915400-212923400 | Weak transcription | Dnd41 | blood |
