The 2.0 version of rSNPBase

Variant report

Variant rs11120010
Chromosome Location chr1:212923100-212923101
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212923200 Weak transcription Brain Cingulate Gyrus brain
2 chr1:212895400-212923400 Weak transcription Fetal Muscle Leg muscle
3 chr1:212895400-212923400 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:212895400-212926400 Weak transcription Esophagus oesophagus
5 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
6 chr1:212895600-212923400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:212895600-212964600 Weak transcription Gastric stomach
8 chr1:212895800-212925600 Weak transcription Small Intestine intestine
9 chr1:212895800-212926200 Weak transcription Hela-S3 cervix
10 chr1:212898600-212923200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:212898800-212934000 Weak transcription Fetal Muscle Trunk muscle
12 chr1:212899800-212926400 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr1:212900400-212923200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:212900400-212927600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr1:212900400-212932600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:212900400-212936200 Weak transcription Aorta Aorta
17 chr1:212901400-212954000 Weak transcription NH-A brain
18 chr1:212902200-212941800 Weak transcription Fetal Kidney kidney
19 chr1:212902600-212943600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:212903000-212923400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr1:212903200-212923400 Weak transcription Duodenum Mucosa Duodenum
22 chr1:212903600-212926400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:212904200-212923200 Weak transcription Adipose Nuclei Adipose
24 chr1:212904800-212926200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:212905200-212923200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr1:212905200-212923400 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:212905600-212923400 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr1:212906200-212923400 Weak transcription HMEC breast
29 chr1:212906800-212923400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:212908000-212933200 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr1:212909400-212923200 Weak transcription Primary B cells from peripheral blood blood
32 chr1:212912000-212923200 Weak transcription Liver Liver
33 chr1:212912000-212935800 Weak transcription K562 blood
34 chr1:212912200-212925800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:212913600-212923200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:212913600-212923400 Weak transcription NHEK skin
37 chr1:212914800-212923400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:212915000-212925800 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr1:212915200-212923400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:212915400-212923400 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr1:212915400-212923400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:212915400-212923400 Weak transcription Dnd41 blood
43 chr1:212915400-212925600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr1:212915400-212932600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:212915400-212933400 Weak transcription Ovary ovary
46 chr1:212915400-212934400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:212915400-212936000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr1:212915400-212942000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:212917400-212923400 Weak transcription Stomach Mucosa stomach
50 chr1:212917400-212926400 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015