The 2.0 version of rSNPBase

Variant report

Variant rs58203936
Chromosome Location chr1:212938905-212938906
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
2 chr1:212895600-212964600 Weak transcription Gastric stomach
3 chr1:212901400-212954000 Weak transcription NH-A brain
4 chr1:212902200-212941800 Weak transcription Fetal Kidney kidney
5 chr1:212902600-212943600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr1:212915400-212942000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr1:212922200-212939600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:212923600-212956200 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:212923600-212963800 Weak transcription Brain Angular Gyrus brain
10 chr1:212923600-212964400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:212923800-212947200 Weak transcription A549 lung
12 chr1:212923800-212957600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:212923800-212964200 Weak transcription HMEC breast
14 chr1:212924000-212954200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:212926600-212939600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr1:212926600-212941800 Weak transcription Stomach Smooth Muscle stomach
17 chr1:212926600-212954200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:212926600-212963400 Weak transcription Rectal Smooth Muscle rectum
19 chr1:212926800-212939600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:212926800-212940600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:212926800-212940800 Weak transcription NHLF lung
22 chr1:212926800-212942200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:212926800-212942400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr1:212926800-212942800 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:212926800-212942800 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:212926800-212947800 Weak transcription NHDF-Ad bronchial
27 chr1:212926800-212948000 Weak transcription Osteobl bone
28 chr1:212926800-212954200 Weak transcription Hela-S3 cervix
29 chr1:212927000-212941800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:212927400-212942400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:212927400-212963400 Weak transcription Small Intestine intestine
32 chr1:212927400-212964200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:212928200-212942400 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr1:212928400-212941800 Weak transcription Brain Anterior Caudate brain
35 chr1:212928400-212941800 Weak transcription Brain Cingulate Gyrus brain
36 chr1:212928400-212942000 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:212928400-212942000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:212928400-212942200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:212928400-212942200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:212928400-212954000 Weak transcription Fetal Brain Male brain
41 chr1:212928400-212956200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:212928600-212939000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:212928600-212939800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:212928600-212940600 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:212928600-212942200 Weak transcription Brain Hippocampus Middle brain
46 chr1:212928600-212942400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:212928600-212942400 Weak transcription Brain Substantia Nigra brain
48 chr1:212928600-212947800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr1:212928600-212954200 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr1:212929000-212947800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015