Variant report

Variant	rs12785046
Chromosome Location	chr10:93048477-93048478
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 93 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:93)

rs_ID	r²[population]
rs10047356	1.00[CEU][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10160027	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10509624	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1057971	1.00[CEU][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186513	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186514	1.00[CEU][hapmap];0.88[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186518	1.00[CEU][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186519	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186522	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186524	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186525	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186526	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12241146	1.00[CEU][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12241950	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12242548	1.00[CEU][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12244459	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12249713	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12251037	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12253484	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12253956	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12263099	1.00[CEU][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12264238	1.00[CEU][hapmap];0.84[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12266301	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12267158	1.00[CEU][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12267225	1.00[CEU][hapmap];0.95[AMR][1000 genomes]
rs12268373	1.00[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12763224	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12764630	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12768356	1.00[CEU][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12774904	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs12775958	1.00[CEU][hapmap];0.85[YRI][hapmap];0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs14611	1.00[CEU][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28459398	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28661426	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34328644	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34663905	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34771310	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35112413	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35222869	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35552285	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35609498	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35818406	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35832595	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35843976	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35848051	0.93[EUR][1000 genomes]
rs35981490	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35984384	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4278434	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4451623	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56693041	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61279719	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6583759	1.00[ASN][1000 genomes]
rs6583761	1.00[ASN][1000 genomes]
rs66464812	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66518918	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66530003	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66538532	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66727333	0.93[EUR][1000 genomes]
rs67319671	1.00[EUR][1000 genomes]
rs67769460	1.00[EUR][1000 genomes]
rs68172749	0.93[EUR][1000 genomes]
rs7068527	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7070119	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7070498	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071503	1.00[CEU][hapmap];0.88[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7074612	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7075114	1.00[CEU][hapmap];0.88[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7080584	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7082510	1.00[CEU][hapmap];0.92[YRI][hapmap];0.83[AFR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7084314	1.00[CEU][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7085732	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7085807	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090340	1.00[CEU][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090907	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7099079	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7894133	0.81[YRI][hapmap];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7896934	1.00[CEU][hapmap];0.89[YRI][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7897104	1.00[CEU][hapmap];0.88[YRI][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900499	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7900890	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7903610	1.00[CEU][hapmap];0.88[YRI][hapmap];0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7905513	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7911817	1.00[CEU][hapmap];0.93[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7912140	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7912950	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7915050	1.00[CEU][hapmap];0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7915347	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7917134	1.00[CEU][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7919961	1.00[CEU][hapmap];0.88[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7920860	1.00[CEU][hapmap];0.89[YRI][hapmap];0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7921621	1.00[CEU][hapmap];0.89[YRI][hapmap];0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9651430	0.82[CEU][hapmap];0.89[YRI][hapmap];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9651432	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93015400-93049000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:93015400-93057800	Weak transcription	Brain Cingulate Gyrus	brain
3	chr10:93015600-93058200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr10:93016600-93056200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr10:93038400-93049200	Weak transcription	Fetal Kidney	kidney
6	chr10:93038800-93048600	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr10:93039000-93048800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:93039000-93049400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:93039000-93049400	Weak transcription	Fetal Lung	lung
10	chr10:93039000-93052000	Weak transcription	GM12878-XiMat	blood
11	chr10:93039000-93058000	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr10:93040400-93050400	Weak transcription	HepG2	liver
13	chr10:93043600-93057800	Weak transcription	Primary T helper cells fromperipheralblood	blood
14	chr10:93043800-93049000	Enhancers	Fetal Heart	heart
15	chr10:93044200-93051600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr10:93044600-93057600	Weak transcription	Primary T cells from cord blood	blood
17	chr10:93044800-93057800	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr10:93045000-93050200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr10:93045000-93055200	Weak transcription	Dnd41	blood
20	chr10:93045400-93049800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr10:93046000-93049600	Enhancers	Right Ventricle	heart
22	chr10:93046200-93057800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr10:93046600-93051200	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr10:93047000-93049800	Enhancers	Left Ventricle	heart
25	chr10:93047000-93053800	Weak transcription	HSMM	muscle
26	chr10:93047400-93049000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr10:93047400-93050000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr10:93047600-93051000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr10:93047600-93051200	Enhancers	Skeletal Muscle Female	skeletal muscle
30	chr10:93047800-93050200	Weak transcription	Lung	lung
31	chr10:93048000-93049200	Weak transcription	HSMMtube	muscle
32	chr10:93048000-93049400	Weak transcription	Psoas Muscle	Psoas
33	chr10:93048000-93058200	Weak transcription	Right Atrium	heart

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