The 2.0 version of rSNPBase

Variant report

Variant rs12800677
Chromosome Location chr11:94281011-94281012
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94276800-94282600 Active TSS Fetal Intestine Large intestine
2 chr11:94277000-94283400 Active TSS GM12878-XiMat blood
3 chr11:94278200-94281200 Enhancers Primary T killer memory cells from peripheral blood blood
4 chr11:94278400-94283400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr11:94278600-94282400 Enhancers Primary T helper cells PMA-I stimulated --
6 chr11:94278600-94282400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr11:94279000-94281400 Enhancers Primary T helper cells fromperipheralblood blood
8 chr11:94279200-94281200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr11:94279200-94282800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr11:94279200-94296000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr11:94279400-94281400 Enhancers Primary T cells from cord blood blood
12 chr11:94279400-94282200 Active TSS Fetal Intestine Small intestine
13 chr11:94279400-94282400 Weak transcription Small Intestine intestine
14 chr11:94279400-94282600 Enhancers Primary mononuclear cells fromperipheralblood Blood
15 chr11:94279400-94287200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:94279600-94281200 Enhancers Primary T regulatory cells fromperipheralblood blood
17 chr11:94279600-94281200 Genic enhancers K562 blood
18 chr11:94279600-94284800 Weak transcription Placenta Placenta
19 chr11:94279600-94285800 Weak transcription Fetal Muscle Trunk muscle
20 chr11:94279600-94287200 Weak transcription Ovary ovary
21 chr11:94279600-94290200 Weak transcription HSMM muscle
22 chr11:94280000-94281200 Enhancers Primary hematopoietic stem cells blood
23 chr11:94280000-94281200 Enhancers Sigmoid Colon Sigmoid Colon
24 chr11:94280000-94281600 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr11:94280200-94281200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr11:94280200-94281200 Enhancers NH-A brain
27 chr11:94280200-94281400 Active TSS Pancreatic Islets Pancreatic Islet
28 chr11:94280200-94282200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr11:94280200-94282400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:94280200-94283400 Enhancers Placenta Amnion Placenta Amnion
31 chr11:94280400-94281400 Weak transcription Pancreas Pancrea
32 chr11:94280400-94281800 Genic enhancers Fetal Muscle Leg muscle
33 chr11:94280400-94281800 Weak transcription Spleen Spleen
34 chr11:94280400-94282000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr11:94280400-94283200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr11:94280400-94283200 Weak transcription Thymus Thymus
37 chr11:94280400-94283400 Weak transcription Primary T cells fromperipheralblood blood
38 chr11:94280400-94283400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr11:94280400-94283600 Weak transcription Lung lung
40 chr11:94280400-94285400 Weak transcription Left Ventricle heart
41 chr11:94280400-94286600 Weak transcription Esophagus oesophagus
42 chr11:94280400-94287200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr11:94280400-94287200 Weak transcription Gastric stomach
44 chr11:94280400-94291200 Weak transcription NHLF lung
45 chr11:94280600-94281200 Weak transcription Primary B cells from cord blood blood
46 chr11:94280600-94281200 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr11:94280600-94281600 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr11:94280600-94281600 Weak transcription Brain Anterior Caudate brain
49 chr11:94280600-94281600 Weak transcription Colonic Mucosa Colon
50 chr11:94280600-94281800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015