The 2.0 version of rSNPBase

Variant report

Variant rs12805587
Chromosome Location chr11:94282464-94282465
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:94276800-94282600 Active TSS Fetal Intestine Large intestine
2 chr11:94277000-94283400 Active TSS GM12878-XiMat blood
3 chr11:94278400-94283400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr11:94279200-94282800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr11:94279200-94296000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr11:94279400-94282600 Enhancers Primary mononuclear cells fromperipheralblood Blood
7 chr11:94279400-94287200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:94279600-94284800 Weak transcription Placenta Placenta
9 chr11:94279600-94285800 Weak transcription Fetal Muscle Trunk muscle
10 chr11:94279600-94287200 Weak transcription Ovary ovary
11 chr11:94279600-94290200 Weak transcription HSMM muscle
12 chr11:94280200-94283400 Enhancers Placenta Amnion Placenta Amnion
13 chr11:94280400-94283200 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr11:94280400-94283200 Weak transcription Thymus Thymus
15 chr11:94280400-94283400 Weak transcription Primary T cells fromperipheralblood blood
16 chr11:94280400-94283400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr11:94280400-94283600 Weak transcription Lung lung
18 chr11:94280400-94285400 Weak transcription Left Ventricle heart
19 chr11:94280400-94286600 Weak transcription Esophagus oesophagus
20 chr11:94280400-94287200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr11:94280400-94287200 Weak transcription Gastric stomach
22 chr11:94280400-94291200 Weak transcription NHLF lung
23 chr11:94280600-94282600 Enhancers Fetal Brain Male brain
24 chr11:94280600-94283200 Weak transcription Brain Angular Gyrus brain
25 chr11:94280600-94287200 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr11:94280600-94296200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr11:94280800-94282600 Weak transcription Right Atrium heart
28 chr11:94280800-94283000 Weak transcription Brain Substantia Nigra brain
29 chr11:94280800-94283400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr11:94280800-94289800 Weak transcription Muscle Satellite Cultured Cells --
31 chr11:94281000-94282600 Genic enhancers Dnd41 blood
32 chr11:94281000-94283400 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr11:94281000-94283400 Weak transcription Fetal Thymus thymus
34 chr11:94281000-94283600 Enhancers Primary neutrophils fromperipheralblood blood
35 chr11:94281000-94289800 Weak transcription Osteobl bone
36 chr11:94281000-94290000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr11:94281000-94290200 Weak transcription NHDF-Ad bronchial
38 chr11:94281000-94319200 Weak transcription Aorta Aorta
39 chr11:94281200-94282600 Enhancers Primary B cells from cord blood blood
40 chr11:94281200-94284000 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr11:94281200-94284400 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr11:94281400-94282600 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr11:94281400-94283000 Enhancers Pancreas Pancrea
44 chr11:94281400-94285600 Enhancers Primary monocytes fromperipheralblood blood
45 chr11:94281600-94282600 Enhancers Breast Myoepithelial Primary Cells Breast
46 chr11:94281600-94282600 Enhancers Colonic Mucosa Colon
47 chr11:94281800-94283000 Enhancers Primary T cells from cord blood blood
48 chr11:94281800-94283600 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
49 chr11:94281800-94283800 Enhancers Brain Cingulate Gyrus brain
50 chr11:94281800-94284000 Enhancers Fetal Brain Female brain

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Last update: Aug 31, 2015